This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qq6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:29, 25 June 2021) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qq6.jpg|left|200px]]<br /><applet load="2qq6" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2qq6, resolution 2.9&Aring;" />
 
-
'''Crystal structure of mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus DSM 9941'''<br />
 
-
==About this Structure==
+
==Crystal structure of mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus DSM 9941==
-
2QQ6 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Rubrobacter_xylanophilus_dsm_9941 Rubrobacter xylanophilus dsm 9941] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQ6 OCA].
+
<StructureSection load='2qq6' size='340' side='right'caption='[[2qq6]]' scene=''>
-
[[Category: Rubrobacter xylanophilus dsm 9941]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QQ6 FirstGlance]. <br>
-
[[Category: Burley, S K.]]
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qq6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qq6 OCA], [https://pdbe.org/2qq6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qq6 RCSB], [https://www.ebi.ac.uk/pdbsum/2qq6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qq6 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qq6 TOPSAN]</span></td></tr>
-
[[Category: Eswaramoorthy, S.]]
+
</table>
-
[[Category: Madegowda, M.]]
+
== Evolutionary Conservation ==
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Swaminathan, S.]]
+
Check<jmol>
-
[[Category: MG]]
+
<jmolCheckbox>
-
[[Category: 9367a]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qq/2qq6_consurf.spt"</scriptWhenChecked>
-
[[Category: enolase]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: isomerase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: mg ion]]
+
</jmolCheckbox>
-
[[Category: new york structural genomix research consortium]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qq6 ConSurf].
-
[[Category: nysgxrc]]
+
<div style="clear:both"></div>
-
[[Category: protein structure initiative]]
+
__TOC__
-
[[Category: psi-2]]
+
</StructureSection>
-
[[Category: structural genomics]]
+
[[Category: Large Structures]]
-
 
+
[[Category: Burley SK]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:41:22 2008''
+
[[Category: Eswaramoorthy S]]
 +
[[Category: Madegowda M]]
 +
[[Category: Swaminathan S]]

Current revision

Crystal structure of mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus DSM 9941

PDB ID 2qq6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools