2qyb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:28, 17 October 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qyb.jpg|left|200px]]<br /><applet load="2qyb" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2qyb, resolution 2.40&Aring;" />
 
-
'''Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA'''<br />
 
-
==About this Structure==
+
==Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA==
-
2QYB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Geobacter_sulfurreducens_pca Geobacter sulfurreducens pca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYB OCA].
+
<StructureSection load='2qyb' size='340' side='right'caption='[[2qyb]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
[[Category: Geobacter sulfurreducens pca]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2qyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_sulfurreducens_PCA Geobacter sulfurreducens PCA]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QYB FirstGlance]. <br>
-
[[Category: Clancy, S.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
[[Category: Duggan, E.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qyb OCA], [https://pdbe.org/2qyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qyb RCSB], [https://www.ebi.ac.uk/pdbsum/2qyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qyb ProSAT], [https://www.topsan.org/Proteins/MCSG/2qyb TOPSAN]</span></td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</table>
-
[[Category: Nocek, B.]]
+
== Function ==
-
[[Category: domain of putative membrane protein]]
+
[https://www.uniprot.org/uniprot/Q74D90_GEOSL Q74D90_GEOSL]
-
[[Category: gaf domain]]
+
== Evolutionary Conservation ==
-
[[Category: mcsg]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: midwest center for structural genomics]]
+
Check<jmol>
-
[[Category: protein structure initiative]]
+
<jmolCheckbox>
-
[[Category: psi-2]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qy/2qyb_consurf.spt"</scriptWhenChecked>
-
[[Category: structural genomics]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:43:14 2008''
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qyb ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Geobacter sulfurreducens PCA]]
 +
[[Category: Large Structures]]
 +
[[Category: Clancy S]]
 +
[[Category: Duggan E]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Nocek B]]

Current revision

Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA

PDB ID 2qyb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools