This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4cba

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:07, 20 December 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4cba| PDB=4cba | SCENE= }}
 
-
===Structural of delta 1-76 CTNNBL1 in space group I222===
 
-
{{ABSTRACT_PUBMED_24269683}}
 
-
==Function==
+
==Structural of delta 1-76 CTNNBL1 in space group I222==
-
[[http://www.uniprot.org/uniprot/CTBL1_HUMAN CTBL1_HUMAN]] Component of the PRP19-CDC5L complex that forms an integral part of the spliceosome and is required for activating pre-mRNA splicing. Participates in AID/AICDA-mediated Ig class switching recombination (CSR). May induce apoptosis.<ref>PMID:12659813</ref> <ref>PMID:18722174</ref>
+
<StructureSection load='4cba' size='340' side='right'caption='[[4cba]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4cba]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CBA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4CBA FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4cba FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cba OCA], [https://pdbe.org/4cba PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4cba RCSB], [https://www.ebi.ac.uk/pdbsum/4cba PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4cba ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CTBL1_HUMAN CTBL1_HUMAN] Component of the PRP19-CDC5L complex that forms an integral part of the spliceosome and is required for activating pre-mRNA splicing. Participates in AID/AICDA-mediated Ig class switching recombination (CSR). May induce apoptosis.<ref>PMID:12659813</ref> <ref>PMID:18722174</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
CTNNBL1 is a spliceosome-associated protein that binds nuclear localization signals (NLSs) in splice factors CDC5L and Prp31 as well as the antibody diversifying enzyme AID. Here, crystal structures of human CTNNBL1 reveal a distinct structure from its closest homologue karyopherin-alphas. CTNNBL1 comprises a HEAT-like domain (including a nuclear export signal), a central armadillo domain, and a coiled-coil C-terminal domain. Structure-guided mutations of the region homologous to the karyopherin-alpha NLS-binding site fail to disrupt CTNNBL1-NLS interactions. Our results identify CTNNBL1 as a unique selective NLS-binding protein with striking differences from karyopherin-alphas.
-
==About this Structure==
+
Structural and mutational analysis reveals that CTNNBL1 binds NLSs in a manner distinct from that of its closest armadillo-relative, karyopherin alpha,Ganesh K, van Maldegem F, Telerman SB, Simpson P, Johnson CM, Williams RL, Neuberger MS, Rada C FEBS Lett. 2013 Nov 20. pii: S0014-5793(13)00847-8. doi:, 10.1016/j.febslet.2013.11.013. PMID:24269683<ref>PMID:24269683</ref>
-
[[4cba]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CBA OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<ref group="xtra">PMID:024269683</ref><references group="xtra"/><references/>
+
</div>
-
[[Category: Ganesh, K.]]
+
<div class="pdbe-citations 4cba" style="background-color:#fffaf0;"></div>
-
[[Category: Johnson, C M.]]
+
== References ==
-
[[Category: Neuberger, M S.]]
+
<references/>
-
[[Category: Rada, C.]]
+
__TOC__
-
[[Category: Simpson, P.]]
+
</StructureSection>
-
[[Category: Telerman, S B.]]
+
[[Category: Homo sapiens]]
-
[[Category: Williams, R L.]]
+
[[Category: Large Structures]]
-
[[Category: VanMaldegem, F.]]
+
[[Category: Ganesh K]]
-
[[Category: Aid]]
+
[[Category: Johnson CM]]
-
[[Category: Apoptosis]]
+
[[Category: Neuberger MS]]
-
[[Category: Deaminase]]
+
[[Category: Rada C]]
-
[[Category: Import]]
+
[[Category: Simpson P]]
 +
[[Category: Telerman SB]]
 +
[[Category: Williams RL]]
 +
[[Category: VanMaldegem F]]

Current revision

Structural of delta 1-76 CTNNBL1 in space group I222

PDB ID 4cba

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools