2rk5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:22, 21 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2rk5.jpg|left|200px]]<br /><applet load="2rk5" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2rk5, resolution 1.50&Aring;" />
 
-
'''Crystal structure of a domain of the putative hemolysin from Streptococcus mutans UA159'''<br />
 
-
==About this Structure==
+
==Crystal structure of a domain of the putative hemolysin from Streptococcus mutans UA159==
-
2RK5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_mutans_ua159 Streptococcus mutans ua159]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RK5 OCA].
+
<StructureSection load='2rk5' size='340' side='right'caption='[[2rk5]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
[[Category: Single protein]]
+
== Structural highlights ==
-
[[Category: Streptococcus mutans ua159]]
+
<table><tr><td colspan='2'>[[2rk5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_mutans_UA159 Streptococcus mutans UA159]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RK5 FirstGlance]. <br>
-
[[Category: Clancy, S.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rk5 OCA], [https://pdbe.org/2rk5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rk5 RCSB], [https://www.ebi.ac.uk/pdbsum/2rk5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rk5 ProSAT], [https://www.topsan.org/Proteins/MCSG/2rk5 TOPSAN]</span></td></tr>
-
[[Category: Li, H.]]
+
</table>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
== Function ==
-
[[Category: Zhang, R.]]
+
[https://www.uniprot.org/uniprot/O68574_STRMG O68574_STRMG]
-
[[Category: hemolysin]]
+
== Evolutionary Conservation ==
-
[[Category: mcsg]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: membrane]]
+
Check<jmol>
-
[[Category: midwest center for structural genomics]]
+
<jmolCheckbox>
-
[[Category: protein structure initiative]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rk/2rk5_consurf.spt"</scriptWhenChecked>
-
[[Category: psi-2]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: structural genomics]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: toxin]]
+
</jmolCheckbox>
-
[[Category: transmembrane]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rk5 ConSurf].
-
 
+
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:47:59 2008''
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Streptococcus mutans UA159]]
 +
[[Category: Clancy S]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Li H]]
 +
[[Category: Zhang R]]

Current revision

Crystal structure of a domain of the putative hemolysin from Streptococcus mutans UA159

PDB ID 2rk5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools