4mvc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:43, 20 September 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4mvc| PDB=4mvc | SCENE= }}
 
-
===Crystal Structure of a Mammalian Cytidylyltransferase===
 
-
==Function==
+
==Crystal Structure of a Mammalian Cytidylyltransferase==
-
[[http://www.uniprot.org/uniprot/PCY1A_RAT PCY1A_RAT]] Controls phosphatidylcholine synthesis.
+
<StructureSection load='4mvc' size='340' side='right'caption='[[4mvc]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4mvc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MVC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MVC FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CDC:[2-CYTIDYLATE-O-PHOSPHONYLOXYL]-ETHYL-TRIMETHYL-AMMONIUM'>CDC</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mvc OCA], [https://pdbe.org/4mvc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mvc RCSB], [https://www.ebi.ac.uk/pdbsum/4mvc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mvc ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PCY1A_RAT PCY1A_RAT] Controls phosphatidylcholine synthesis.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
CTP:phosphocholine cytidylyltransferase (CCT) interconverts between an inactive soluble and active membrane-bound form in response to changes in membrane lipid composition. Activation involves disruption of an inhibitory interaction between the alphaE helices at the base of the active site and an autoinhibitory (AI) segment in the regulatory M domain and membrane insertion of the M domain as an amphipathic helix. We show that in the CCT soluble form the AI segment functions to suppress kcat and elevate the Km for CTP. The crystal structure of a CCT dimer composed of the catalytic and AI segments reveals an AI-alphaE interaction as a cluster of four amphipathic helices (two alphaE and two AI helices) at the base of the active sites. This interaction corroborates mutagenesis implicating multiple hydrophobic residues within the AI segment that contribute to its silencing function. The AI-alphaE interaction directs the turn at the C-terminal end of the AI helix into backbone-to-backbone contact with a loop (L2) at the opening to the active site, which houses the key catalytic residue, lysine 122. Molecular dynamics simulations suggest that lysine 122 side-chain orientations are constrained by contacts with the AI helix-turn, which could obstruct its engagement with substrates. This work deciphers how the CCT regulatory amphipathic helix functions as a silencing device.
-
==About this Structure==
+
Structural Basis for Autoinhibition of CTP:Phosphocholine Cytidylyltransferase (CCT), the Regulatory Enzyme in Phosphatidylcholine Synthesis, by Its Membrane-binding Amphipathic Helix.,Lee J, Taneva SG, Holland BW, Tieleman DP, Cornell RB J Biol Chem. 2014 Jan 17;289(3):1742-55. doi: 10.1074/jbc.M113.526970. Epub 2013 , Nov 25. PMID:24275660<ref>PMID:24275660</ref>
-
[[4mvc]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MVC OCA].
+
 
-
[[Category: Choline-phosphate cytidylyltransferase]]
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Cornell, R B.]]
+
</div>
-
[[Category: Lee, J.]]
+
<div class="pdbe-citations 4mvc" style="background-color:#fffaf0;"></div>
-
[[Category: Amphipathic helix]]
+
== References ==
-
[[Category: Cytidine 5 -diphosphocholine synthesis]]
+
<references/>
-
[[Category: Endoplasmic reticulum]]
+
__TOC__
-
[[Category: Lipid membrane binding]]
+
</StructureSection>
-
[[Category: Lipid membrane surface]]
+
[[Category: Large Structures]]
-
[[Category: Nucleus]]
+
[[Category: Rattus norvegicus]]
-
[[Category: Phosphatidylcholine homeostasis]]
+
[[Category: Cornell RB]]
-
[[Category: Rossmann fold]]
+
[[Category: Lee J]]
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of a Mammalian Cytidylyltransferase

PDB ID 4mvc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools