This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2tpi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:28, 23 March 2022) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2tpi.jpg|left|200px]]<br /><applet load="2tpi" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2tpi, resolution 2.1&Aring;" />
 
-
'''ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN. CHEMICAL LABELLING AND LOW-TEMPERATURE CRYSTALLOGRAPHY'''<br />
 
-
==About this Structure==
+
==ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN. CHEMICAL LABELLING AND LOW-TEMPERATURE CRYSTALLOGRAPHY==
-
2TPI is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with <scene name='pdbligand=HG:'>HG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2TPI OCA].
+
<StructureSection load='2tpi' size='340' side='right'caption='[[2tpi]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
[[Category: Bos taurus]]
+
== Structural highlights ==
-
[[Category: Protein complex]]
+
<table><tr><td colspan='2'>[[2tpi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2TPI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2TPI FirstGlance]. <br>
-
[[Category: Bartunik, H.]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=ILE:ISOLEUCINE'>ILE</scene>, <scene name='pdbligand=VAL:VALINE'>VAL</scene></td></tr>
-
[[Category: Bode, W.]]
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
-
[[Category: Huber, R.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2tpi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2tpi OCA], [https://pdbe.org/2tpi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2tpi RCSB], [https://www.ebi.ac.uk/pdbsum/2tpi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2tpi ProSAT]</span></td></tr>
-
[[Category: Singh, T P.]]
+
</table>
-
[[Category: Steigemann, W.]]
+
== Function ==
-
[[Category: Walter, J.]]
+
[[https://www.uniprot.org/uniprot/BPT1_BOVIN BPT1_BOVIN]] Inhibits trypsin, kallikrein, chymotrypsin, and plasmin.
-
[[Category: HG]]
+
== Evolutionary Conservation ==
-
[[Category: complex (proteinase/inhibitor)]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tp/2tpi_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2tpi ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:49:52 2008''
+
==See Also==
 +
*[[BPTI 3D structures|BPTI 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bos taurus]]
 +
[[Category: Large Structures]]
 +
[[Category: Trypsin]]
 +
[[Category: Bartunik, H]]
 +
[[Category: Bode, W]]
 +
[[Category: Huber, R]]
 +
[[Category: Singh, T P]]
 +
[[Category: Steigemann, W]]
 +
[[Category: Walter, J]]
 +
[[Category: Hydrolase-hydrolase inhibitor complex]]

Current revision

ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN. CHEMICAL LABELLING AND LOW-TEMPERATURE CRYSTALLOGRAPHY

PDB ID 2tpi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools