4lp7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:22, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4lp7| PDB=4lp7 | SCENE= }}
 
-
===Crystal structure of the human metapneumovirus matrix protein===
 
-
{{ABSTRACT_PUBMED_24316400}}
 
-
==About this Structure==
+
==Crystal structure of the human metapneumovirus matrix protein==
-
[[4lp7]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LP7 OCA].
+
<StructureSection load='4lp7' size='340' side='right'caption='[[4lp7]], [[Resolution|resolution]] 2.83&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4lp7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_metapneumovirus Human metapneumovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LP7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LP7 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.83&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lp7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lp7 OCA], [https://pdbe.org/4lp7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lp7 RCSB], [https://www.ebi.ac.uk/pdbsum/4lp7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lp7 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q91F56_9MONO Q91F56_9MONO]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The matrix protein (M) of paramyxoviruses plays a key role in determining virion morphology by directing viral assembly and budding. Here, we report the crystal structure of the human metapneumovirus M at 2.8 A resolution in its native dimeric state. The structure reveals the presence of a high-affinity Ca2+ binding site. Molecular dynamics simulations (MDS) predict a secondary lower-affinity site that correlates well with data from fluorescence-based thermal shift assays. By combining small-angle X-ray scattering with MDS and ensemble analysis, we captured the structure and dynamics of M in solution. Our analysis reveals a large positively charged patch on the protein surface that is involved in membrane interaction. Structural analysis of DOPC-induced polymerization of M into helical filaments using electron microscopy leads to a model of M self-assembly. The conservation of the Ca2+ binding sites suggests a role for calcium in the replication and morphogenesis of pneumoviruses.
-
==Reference==
+
Structure and Self-Assembly of the Calcium Binding Matrix Protein of Human Metapneumovirus.,Leyrat C, Renner M, Harlos K, Huiskonen JT, Grimes JM Structure. 2013 Dec 3. pii: S0969-2126(13)00425-5. doi:, 10.1016/j.str.2013.10.013. PMID:24316400<ref>PMID:24316400</ref>
-
<ref group="xtra">PMID:024316400</ref><references group="xtra"/><references/>
+
 
-
[[Category: Grimes, J M.]]
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Harlos, K.]]
+
</div>
-
[[Category: Leyrat, C.]]
+
<div class="pdbe-citations 4lp7" style="background-color:#fffaf0;"></div>
-
[[Category: Calcium binding protein]]
+
== References ==
-
[[Category: Lipid binding]]
+
<references/>
-
[[Category: Twisted beta sandwich]]
+
__TOC__
-
[[Category: Viral matrix]]
+
</StructureSection>
 +
[[Category: Human metapneumovirus]]
 +
[[Category: Large Structures]]
 +
[[Category: Grimes JM]]
 +
[[Category: Harlos K]]
 +
[[Category: Leyrat C]]

Current revision

Crystal structure of the human metapneumovirus matrix protein

PDB ID 4lp7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools