2v38

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[[Image:2v38.gif|left|200px]]<br /><applet load="2v38" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2v38, resolution 1.50&Aring;" />
 
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'''FAMILY 5 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN COMPLEX WITH CELLOBIO-DERIVED NOEUROMYCIN'''<br />
 
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==About this Structure==
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==Family 5 endoglucanase Cel5A from Bacillus agaradhaerens in complex with cellobio-derived noeuromycin==
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2V38 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_agaradhaerens Bacillus agaradhaerens] with <scene name='pdbligand=IDR:'>IDR</scene>, <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=NOY:'>NOY</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] Known structural/functional Sites: <scene name='pdbsite=AC1:Gol+Binding+Site+For+Residue+A+1305'>AC1</scene>, <scene name='pdbsite=AC2:Gol+Binding+Site+For+Residue+A+1306'>AC2</scene>, <scene name='pdbsite=AC3:Gol+Binding+Site+For+Residue+A+1307'>AC3</scene>, <scene name='pdbsite=AC4:So4+Binding+Site+For+Residue+A+1308'>AC4</scene>, <scene name='pdbsite=AC5:Noy+Binding+Site+For+Residue+A+1309'>AC5</scene> and <scene name='pdbsite=AC6:Idr+Binding+Site+For+Residue+A+1310'>AC6</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V38 OCA].
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<StructureSection load='2v38' size='340' side='right'caption='[[2v38]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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[[Category: Bacillus agaradhaerens]]
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== Structural highlights ==
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[[Category: Cellulase]]
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<table><tr><td colspan='2'>[[2v38]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salipaludibacillus_agaradhaerens Salipaludibacillus agaradhaerens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V38 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V38 FirstGlance]. <br>
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[[Category: Single protein]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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[[Category: Davies, G J.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IDR:L-IDURONIC+ACID'>IDR</scene>, <scene name='pdbligand=IFL:(3S,4R,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)PIPERIDIN-2-ONE'>IFL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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[[Category: Gloster, T M.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v38 OCA], [https://pdbe.org/2v38 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v38 RCSB], [https://www.ebi.ac.uk/pdbsum/2v38 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v38 ProSAT]</span></td></tr>
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[[Category: Meloncelli, P J.]]
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</table>
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[[Category: Money, V A.]]
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== Function ==
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[[Category: Stick, R V.]]
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[https://www.uniprot.org/uniprot/GUN5_SALAG GUN5_SALAG]
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[[Category: Tarling, C A.]]
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== Evolutionary Conservation ==
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[[Category: Withers, S G.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: GOL]]
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Check<jmol>
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[[Category: IDR]]
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<jmolCheckbox>
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[[Category: NOY]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v3/2v38_consurf.spt"</scriptWhenChecked>
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[[Category: SO4]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: carbohydrate metabolism]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: cellulose degradation]]
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</jmolCheckbox>
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[[Category: endoglucanase]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v38 ConSurf].
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[[Category: family 5]]
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<div style="clear:both"></div>
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[[Category: glycosidase]]
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[[Category: glycoside hydrolase]]
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[[Category: hydrolase]]
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[[Category: noeuromycin]]
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[[Category: polysaccharide degradation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:52:53 2008''
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==See Also==
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*[[Glucanase 3D structures|Glucanase 3D structures]]
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Salipaludibacillus agaradhaerens]]
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[[Category: Davies GJ]]
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[[Category: Gloster TM]]
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[[Category: Meloncelli PJ]]
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[[Category: Money VA]]
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[[Category: Stick RV]]
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[[Category: Tarling CA]]
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[[Category: Withers SG]]

Current revision

Family 5 endoglucanase Cel5A from Bacillus agaradhaerens in complex with cellobio-derived noeuromycin

PDB ID 2v38

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OCA

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