This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4o8a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:38, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4o8a| PDB=4o8a | SCENE= }}
 
-
===First structure of a proline utilization A proline dehydrogenase domain===
 
-
{{ABSTRACT_PUBMED_12514740}}
 
-
==Function==
+
==First structure of a proline utilization A proline dehydrogenase domain==
-
[[http://www.uniprot.org/uniprot/PUTA_ECOLI PUTA_ECOLI]] Oxidizes proline to glutamate for use as a carbon and nitrogen source and also function as a transcriptional repressor of the put operon.
+
<StructureSection load='4o8a' size='340' side='right'caption='[[4o8a]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4o8a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1k87 1k87]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4O8A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4O8A FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2OP:(2S)-2-HYDROXYPROPANOIC+ACID'>2OP</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4o8a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4o8a OCA], [https://pdbe.org/4o8a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4o8a RCSB], [https://www.ebi.ac.uk/pdbsum/4o8a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4o8a ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PUTA_ECOLI PUTA_ECOLI] Oxidizes proline to glutamate for use as a carbon and nitrogen source and also function as a transcriptional repressor of the put operon.
-
==About this Structure==
+
==See Also==
-
[[4o8a]] is a 1 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1k87 1k87]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4O8A OCA].
+
*[[Proline utilization A|Proline utilization A]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:012514740</ref><references group="xtra"/><references/>
+
[[Category: Escherichia coli K-12]]
-
[[Category: Tanner, J J.]]
+
[[Category: Large Structures]]
-
[[Category: Aldehyde dehydrogenase]]
+
[[Category: Tanner JJ]]
-
[[Category: Flavoenzyme]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Proline dehydrogenase]]
+
-
[[Category: Proline utilization some]]
+
-
[[Category: Puta]]
+

Current revision

First structure of a proline utilization A proline dehydrogenase domain

PDB ID 4o8a

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4o8a"
Personal tools