2z00
From Proteopedia
(Difference between revisions)
| (12 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2z00.jpg|left|200px]]<br /><applet load="2z00" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2z00, resolution 2.42Å" /> | ||
| - | '''Crystal structure of dihydroorotase from Thermus thermophilus'''<br /> | ||
| - | == | + | ==Crystal structure of dihydroorotase from Thermus thermophilus== |
| - | + | <StructureSection load='2z00' size='340' side='right'caption='[[2z00]], [[Resolution|resolution]] 2.42Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2z00]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z00 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z00 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.42Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z00 OCA], [https://pdbe.org/2z00 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z00 RCSB], [https://www.ebi.ac.uk/pdbsum/2z00 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z00 ProSAT], [https://www.topsan.org/Proteins/RSGI/2z00 TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | [ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/PYRC_THET8 PYRC_THET8] Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.[HAMAP-Rule:MF_00220] |
| - | + | == Evolutionary Conservation == | |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z0/2z00_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | + | </jmolCheckbox> | |
| - | [ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z00 ConSurf]. |
| - | [[ | + | <div style="clear:both"></div> |
| - | [ | + | |
| - | + | ||
| - | + | ==See Also== | |
| + | *[[Dihydroorotase 3D structures|Dihydroorotase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Thermus thermophilus HB8]] | ||
| + | [[Category: Baba S]] | ||
| + | [[Category: Kanagawa M]] | ||
| + | [[Category: Kawai G]] | ||
| + | [[Category: Kuramitsu S]] | ||
| + | [[Category: Sampei G]] | ||
| + | [[Category: Yokoyama S]] | ||
Current revision
Crystal structure of dihydroorotase from Thermus thermophilus
| |||||||||||
