2yey

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{{Large structure}}
 
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{{STRUCTURE_2yey| PDB=2yey | SCENE= }}
 
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===Crystal structure of the allosteric-defective chaperonin GroEL E434K mutant===
 
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{{ABSTRACT_PUBMED_16904907}}
 
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==Function==
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==Crystal structure of the allosteric-defective chaperonin GroEL E434K mutant==
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[[http://www.uniprot.org/uniprot/CH60_ECOLI CH60_ECOLI]] Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.[HAMAP-Rule:MF_00600] Essential for the growth of the bacteria and the assembly of several bacteriophages. Also plays a role in coupling between replication of the F plasmid and cell division of the cell.[HAMAP-Rule:MF_00600]
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<StructureSection load='2yey' size='340' side='right'caption='[[2yey]], [[Resolution|resolution]] 4.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2yey]] is a 14 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3fbh 3fbh]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YEY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YEY FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yey FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yey OCA], [https://pdbe.org/2yey PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yey RCSB], [https://www.ebi.ac.uk/pdbsum/2yey PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yey ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CH60_ECOLI CH60_ECOLI] Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.[HAMAP-Rule:MF_00600] Essential for the growth of the bacteria and the assembly of several bacteriophages. Also plays a role in coupling between replication of the F plasmid and cell division of the cell.[HAMAP-Rule:MF_00600]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The chaperonin GroEL adopts a double-ring structure with various modes of allosteric communication. The simultaneous positive intra-ring and negative inter-ring co-operativities alternate the functionality of the folding cavities in both protein rings. Negative inter-ring co-operativity is maintained through different inter-ring interactions, including a salt bridge involving Glu 461. Replacement of this residue by Lys modifies the temperature sensitivity of the substrate-folding activity of this protein, most likely as a result of the loss of inter-ring co-operativity. The crystal structure of the mutant chaperonin GroELE461K has been determined at 3.3A and compared with other structures: the wild-type GroEL, an allosteric defective GroEL double mutant and the GroEL-GroES-(ADP)7 complex. The inter-ring region of the mutant exhibits the following characteristics: (i) no salt-bridge stabilizes the inter-ring interface; (ii) the mutated residue plays a central role in defining the relative ring rotation (of about 22 degrees) around the 7-fold axis; (iii) an increase in the inter-ring distance and solvent accessibility of the inter-ring interface; and (iv) a 2-fold reduction in the stabilization energy of the inter-ring interface, due to the modification of inter-ring interactions. These characteristics explain how the thermal sensitivity of the protein's fundamental properties permits GroEL to distinguish physiological (37 degrees C) from stress (42 degrees C) temperatures.
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==About this Structure==
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Crystal structure of the temperature-sensitive and allosteric-defective chaperonin GroELE461K.,Cabo-Bilbao A, Spinelli S, Sot B, Agirre J, Mechaly AE, Muga A, Guerin DM J Struct Biol. 2006 Sep;155(3):482-92. Epub 2006 Jul 8. PMID:16904907<ref>PMID:16904907</ref>
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[[2yey]] is a 14 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3fbh 3fbh]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YEY OCA].
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==See Also==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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*[[Chaperonin|Chaperonin]]
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</div>
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<div class="pdbe-citations 2yey" style="background-color:#fffaf0;"></div>
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==Reference==
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==See Also==
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<ref group="xtra">PMID:016904907</ref><references group="xtra"/><references/>
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*[[Chaperonin 3D structures|Chaperonin 3D structures]]
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[[Category: Ecoli]]
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== References ==
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[[Category: Agirre, J.]]
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<references/>
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[[Category: Cabo-Bilbao, A.]]
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__TOC__
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[[Category: Guerin, D M.A.]]
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</StructureSection>
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[[Category: Mechaly, A E.]]
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[[Category: Escherichia coli K-12]]
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[[Category: Muga, A.]]
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[[Category: Large Structures]]
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[[Category: Sot, B.]]
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[[Category: Agirre J]]
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[[Category: Spinelli, S.]]
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[[Category: Cabo-Bilbao A]]
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[[Category: Chaperone]]
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[[Category: Guerin DMA]]
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[[Category: Chaperonin]]
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[[Category: Mechaly AE]]
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[[Category: Cooperativity]]
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[[Category: Muga A]]
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[[Category: Low-resolution refinement]]
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[[Category: Sot B]]
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[[Category: Twinning]]
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[[Category: Spinelli S]]

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Crystal structure of the allosteric-defective chaperonin GroEL E434K mutant

PDB ID 2yey

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