1e0v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:56, 20 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_1e0v| PDB=1e0v | SCENE= }}
 
-
===Xylanase 10A from Sreptomyces lividans. cellobiosyl-enzyme intermediate at 1.7 A===
 
-
{{ABSTRACT_PUBMED_10930426}}
 
-
==Function==
+
==Xylanase 10A from Sreptomyces lividans. cellobiosyl-enzyme intermediate at 1.7 A==
-
[[http://www.uniprot.org/uniprot/XYNA_STRLI XYNA_STRLI]] Contributes to hydrolyze hemicellulose, the major component of plant cell-walls. XLNA and XLNB seem to act sequentially on the substrate to yield xylobiose and xylose as carbon sources.
+
<StructureSection load='1e0v' size='340' side='right'caption='[[1e0v]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[1e0v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_lividans Streptomyces lividans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E0V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E0V FirstGlance]. <br>
-
[[1e0v]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"actinomyces_lividans"_krasil'nikov_et_al._1965 "actinomyces lividans" krasil'nikov et al. 1965]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E0V OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=G2F:2-DEOXY-2-FLUORO-ALPHA-D-GLUCOPYRANOSE'>G2F</scene>, <scene name='pdbligand=PRD_900050:2-deoxy-2-fluoro-beta-cellobiose'>PRD_900050</scene></td></tr>
-
==Reference==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e0v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e0v OCA], [https://pdbe.org/1e0v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e0v RCSB], [https://www.ebi.ac.uk/pdbsum/1e0v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e0v ProSAT]</span></td></tr>
-
<ref group="xtra">PMID:010930426</ref><references group="xtra"/><references/>
+
</table>
-
[[Category: Actinomyces lividans krasil'nikov et al. 1965]]
+
== Function ==
-
[[Category: Endo-1,4-beta-xylanase]]
+
[https://www.uniprot.org/uniprot/XYNA_STRLI XYNA_STRLI] Contributes to hydrolyze hemicellulose, the major component of plant cell-walls. XLNA and XLNB seem to act sequentially on the substrate to yield xylobiose and xylose as carbon sources.
-
[[Category: Charnock, S J.]]
+
== Evolutionary Conservation ==
-
[[Category: Dauter, Z.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Davies, G J.]]
+
Check<jmol>
-
[[Category: Derewenda, U.]]
+
<jmolCheckbox>
-
[[Category: Derewenda, Z S.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e0/1e0v_consurf.spt"</scriptWhenChecked>
-
[[Category: Ducros, V.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Dupont, C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Kluepfel, D.]]
+
</jmolCheckbox>
-
[[Category: Morosoli, R.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e0v ConSurf].
-
[[Category: Shareck, F.]]
+
<div style="clear:both"></div>
-
[[Category: Glycosyl-enzyme intermediate]]
+
__TOC__
-
[[Category: Hydrolase]]
+
</StructureSection>
-
[[Category: Xylan degradation]]
+
[[Category: Large Structures]]
-
[[Category: Xylanase]]
+
[[Category: Streptomyces lividans]]
 +
[[Category: Charnock SJ]]
 +
[[Category: Dauter Z]]
 +
[[Category: Davies GJ]]
 +
[[Category: Derewenda U]]
 +
[[Category: Derewenda ZS]]
 +
[[Category: Ducros V]]
 +
[[Category: Dupont C]]
 +
[[Category: Kluepfel D]]
 +
[[Category: Morosoli R]]
 +
[[Category: Shareck F]]

Current revision

Xylanase 10A from Sreptomyces lividans. cellobiosyl-enzyme intermediate at 1.7 A

PDB ID 1e0v

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools