3qyc
From Proteopedia
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| - | {{STRUCTURE_3qyc| PDB=3qyc | SCENE= }} | ||
| - | ===Structure of a dimeric anti-HER2 single domain antibody=== | ||
| - | {{ABSTRACT_PUBMED_22253912}} | ||
| - | == | + | ==Structure of a dimeric anti-HER2 single domain antibody== |
| - | [[3qyc]] is a 2 chain structure with sequence from [ | + | <StructureSection load='3qyc' size='340' side='right'caption='[[3qyc]], [[Resolution|resolution]] 1.60Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3qyc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QYC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QYC FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qyc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qyc OCA], [https://pdbe.org/3qyc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qyc RCSB], [https://www.ebi.ac.uk/pdbsum/3qyc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qyc ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Single-domain antibodies (sdAbs) derived from human V(H) are considered to be less soluble and prone to aggregate which makes it difficult to determine the crystal structures. In this study, we isolated and characterized two anti-human epidermal growth factor receptor-2 (HER2) sdAbs, Gr3 and Gr6, from a synthetic human V(H) phage display library. Size exclusion chromatography and surface plasmon resonance analyses demonstrated that Gr3 is a monomer, but that Gr6 is a strict dimer. To understand this different molecular behavior, we solved the crystal structure of Gr6 to 1.6 A resolution. The crystal structure revealed that the homodimer assembly of Gr6 closely mimics the V(H)-V(L) heterodimer of immunoglobulin variable domains and the dimerization interface is dominated by hydrophobic interactions. | ||
| - | + | Crystal Structure of a Human Single Domain Antibody Dimer Formed through V(H)-V(H) Non-Covalent Interactions.,Baral TN, Chao SY, Li S, Tanha J, Arbabi-Ghahroudi M, Zhang J, Wang S PLoS One. 2012;7(1):e30149. Epub 2012 Jan 12. PMID:22253912<ref>PMID:22253912</ref> | |
| - | <ref | + | |
| - | [[Category: | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| - | [[Category: Arbabai | + | </div> |
| - | [[Category: Baral | + | <div class="pdbe-citations 3qyc" style="background-color:#fffaf0;"></div> |
| - | [[Category: Chao | + | |
| - | [[Category: Li | + | ==See Also== |
| - | [[Category: Tanha | + | *[[Antibody 3D structures|Antibody 3D structures]] |
| - | [[Category: Wang | + | == References == |
| - | [[Category: Zhang | + | <references/> |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Homo sapiens]] | |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Arbabai M]] | ||
| + | [[Category: Baral TN]] | ||
| + | [[Category: Chao S]] | ||
| + | [[Category: Li S]] | ||
| + | [[Category: Tanha J]] | ||
| + | [[Category: Wang S]] | ||
| + | [[Category: Zhang J]] | ||
Current revision
Structure of a dimeric anti-HER2 single domain antibody
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Categories: Homo sapiens | Large Structures | Arbabai M | Baral TN | Chao S | Li S | Tanha J | Wang S | Zhang J
