3bjs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:29, 21 February 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bjs.jpg|left|200px]]<br /><applet load="3bjs" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="3bjs, resolution 2.70&Aring;" />
 
-
'''Crystal structure of a member of enolase superfamily from Polaromonas sp. JS666'''<br />
 
-
==About this Structure==
+
==Crystal structure of a member of enolase superfamily from Polaromonas sp. JS666==
-
3BJS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Polaromonas_sp._js666 Polaromonas sp. js666] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJS OCA].
+
<StructureSection load='3bjs' size='340' side='right'caption='[[3bjs]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
[[Category: Polaromonas sp. js666]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[3bjs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Polaromonas_sp._JS666 Polaromonas sp. JS666]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BJS FirstGlance]. <br>
-
[[Category: Almo, S C.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
[[Category: Bonanno, J B.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
[[Category: Burley, S K.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bjs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bjs OCA], [https://pdbe.org/3bjs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bjs RCSB], [https://www.ebi.ac.uk/pdbsum/3bjs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bjs ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bjs TOPSAN]</span></td></tr>
-
[[Category: Dickey, M.]]
+
</table>
-
[[Category: Gerlt, J.]]
+
== Function ==
-
[[Category: Gheyi, T.]]
+
[https://www.uniprot.org/uniprot/Q120Q7_POLSJ Q120Q7_POLSJ]
-
[[Category: Groshong, C.]]
+
== Evolutionary Conservation ==
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Ozyurt, S.]]
+
Check<jmol>
-
[[Category: Patskovsky, Y.]]
+
<jmolCheckbox>
-
[[Category: Reyes, C.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/3bjs_consurf.spt"</scriptWhenChecked>
-
[[Category: Sauder, J M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Smith, D.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Wasserman, S R.]]
+
</jmolCheckbox>
-
[[Category: MG]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bjs ConSurf].
-
[[Category: enolase]]
+
<div style="clear:both"></div>
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc]]
+
-
[[Category: plasmid]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: racemase]]
+
-
[[Category: structural genomics]]
+
-
[[Category: unknown function]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:06:19 2008''
+
==See Also==
 +
*[[Enolase 3D structures|Enolase 3D structures]]
 +
*[[Mandelate racemase|Mandelate racemase]]
 +
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Polaromonas sp. JS666]]
 +
[[Category: Almo SC]]
 +
[[Category: Bonanno JB]]
 +
[[Category: Burley SK]]
 +
[[Category: Dickey M]]
 +
[[Category: Gerlt J]]
 +
[[Category: Gheyi T]]
 +
[[Category: Groshong C]]
 +
[[Category: Ozyurt S]]
 +
[[Category: Patskovsky Y]]
 +
[[Category: Reyes C]]
 +
[[Category: Sauder JM]]
 +
[[Category: Smith D]]
 +
[[Category: Wasserman SR]]

Current revision

Crystal structure of a member of enolase superfamily from Polaromonas sp. JS666

PDB ID 3bjs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3bjs"
Personal tools