3boh

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[[Image:3boh.jpg|left|200px]]<br /><applet load="3boh" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="3boh, resolution 1.70&Aring;" />
 
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'''Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 1 with acetate (CDCA1-R1)'''<br />
 
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==About this Structure==
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==Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 1 with acetate (CDCA1-R1)==
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3BOH is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thalassiosira_weissflogii Thalassiosira weissflogii] with <scene name='pdbligand=CD:'>CD</scene> and <scene name='pdbligand=ACT:'>ACT</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Cd+Binding+Site+For+Residue+A+1001'>AC1</scene>, <scene name='pdbsite=AC2:Act+Binding+Site+For+Residue+A+1002'>AC2</scene>, <scene name='pdbsite=AC3:Cd+Binding+Site+For+Residue+B+1001'>AC3</scene> and <scene name='pdbsite=AC4:Act+Binding+Site+For+Residue+B+1002'>AC4</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOH OCA].
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<StructureSection load='3boh' size='340' side='right'caption='[[3boh]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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[[Category: Single protein]]
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== Structural highlights ==
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[[Category: Thalassiosira weissflogii]]
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<table><tr><td colspan='2'>[[3boh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Conticribra_weissflogii Conticribra weissflogii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BOH FirstGlance]. <br>
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[[Category: Feng, L.]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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[[Category: Jeffrey, P D.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
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[[Category: Morel, F M.M.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3boh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3boh OCA], [https://pdbe.org/3boh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3boh RCSB], [https://www.ebi.ac.uk/pdbsum/3boh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3boh ProSAT]</span></td></tr>
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[[Category: Shi, Y.]]
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</table>
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[[Category: Xu, Y.]]
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== Function ==
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[[Category: ACT]]
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[https://www.uniprot.org/uniprot/Q50EL4_THAWE Q50EL4_THAWE]
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[[Category: CD]]
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<div style="background-color:#fffaf0;">
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[[Category: acetate bound]]
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== Publication Abstract from PubMed ==
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[[Category: cadmium-bound]]
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Carbonic anhydrase, a zinc enzyme found in organisms from all kingdoms, catalyses the reversible hydration of carbon dioxide and is used for inorganic carbon acquisition by phytoplankton. In the oceans, where zinc is nearly depleted, diatoms use cadmium as a catalytic metal atom in cadmium carbonic anhydrase (CDCA). Here we report the crystal structures of CDCA in four distinct forms: cadmium-bound, zinc-bound, metal-free and acetate-bound. Despite lack of sequence homology, CDCA is a structural mimic of a functional beta-carbonic anhydrase dimer, with striking similarity in the spatial organization of the active site residues. CDCA readily exchanges cadmium and zinc at its active site--an apparently unique adaptation to oceanic life that is explained by a stable opening of the metal coordinating site in the absence of metal. Given the central role of diatoms in exporting carbon to the deep sea, their use of cadmium in an enzyme critical for carbon acquisition establishes a remarkable link between the global cycles of cadmium and carbon.
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[[Category: carbonic anhydrase]]
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[[Category: marine diatom]]
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[[Category: oxidoreductase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:06:45 2008''
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Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms.,Xu Y, Feng L, Jeffrey PD, Shi Y, Morel FM Nature. 2008 Mar 6;452(7183):56-61. PMID:18322527<ref>PMID:18322527</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3boh" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Carbonic anhydrase 3D structures|Carbonic anhydrase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Conticribra weissflogii]]
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[[Category: Large Structures]]
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[[Category: Feng L]]
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[[Category: Jeffrey PD]]
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[[Category: Morel FMM]]
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[[Category: Shi Y]]
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[[Category: Xu Y]]

Current revision

Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 1 with acetate (CDCA1-R1)

PDB ID 3boh

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