3c18

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:29, 1 February 2023) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3c18.jpg|left|200px]]<br /><applet load="3c18" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="3c18, resolution 1.900&Aring;" />
 
-
'''Crystal structure of nucleotidyltransferase-like protein (ZP_00538802.1) from Exiguobacterium sibiricum 255-15 at 1.90 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of nucleotidyltransferase-like protein (ZP_00538802.1) from Exiguobacterium sibiricum 255-15 at 1.90 A resolution==
-
3C18 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria] with <scene name='pdbligand=CL:'>CL</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Cl+Binding+Site+For+Residue+C+290'>AC1</scene>, <scene name='pdbsite=AC2:Cl+Binding+Site+For+Residue+C+291'>AC2</scene>, <scene name='pdbsite=AC3:Cl+Binding+Site+For+Residue+B+290'>AC3</scene>, <scene name='pdbsite=AC4:Gol+Binding+Site+For+Residue+B+291'>AC4</scene>, <scene name='pdbsite=AC5:Gol+Binding+Site+For+Residue+A+290'>AC5</scene>, <scene name='pdbsite=AC6:Gol+Binding+Site+For+Residue+B+292'>AC6</scene> and <scene name='pdbsite=AC7:Gol+Binding+Site+For+Residue+B+293'>AC7</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C18 OCA].
+
<StructureSection load='3c18' size='340' side='right'caption='[[3c18]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
[[Category: Bacteria]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[3c18]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Exiguobacterium_sibiricum_255-15 Exiguobacterium sibiricum 255-15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C18 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C18 FirstGlance]. <br>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: CL]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c18 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c18 OCA], [https://pdbe.org/3c18 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c18 RCSB], [https://www.ebi.ac.uk/pdbsum/3c18 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c18 ProSAT], [https://www.topsan.org/Proteins/JCSG/3c18 TOPSAN]</span></td></tr>
-
[[Category: GOL]]
+
</table>
-
[[Category: jcsg]]
+
== Function ==
-
[[Category: joint center for structural genomics]]
+
[https://www.uniprot.org/uniprot/B1YK61_EXIS2 B1YK61_EXIS2]
-
[[Category: nucleotidyltransferase-like protein]]
+
== Evolutionary Conservation ==
-
[[Category: protein structure initiative]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: psi-2]]
+
Check<jmol>
-
[[Category: structural genomics]]
+
<jmolCheckbox>
-
[[Category: zp_00538802 1]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c1/3c18_consurf.spt"</scriptWhenChecked>
-
 
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:08:05 2008''
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c18 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Exiguobacterium sibiricum 255-15]]
 +
[[Category: Large Structures]]

Current revision

Crystal structure of nucleotidyltransferase-like protein (ZP_00538802.1) from Exiguobacterium sibiricum 255-15 at 1.90 A resolution

PDB ID 3c18

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3c18"
Personal tools