4kpi
From Proteopedia
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- | {{STRUCTURE_4kpi| PDB=4kpi | SCENE= }} | ||
- | ===Rotational order-disorder structure of reversibly photoswitchable red fluorescent protein rsTagRFP=== | ||
- | {{ABSTRACT_PUBMED_24419376}} | ||
- | == | + | ==Rotational order-disorder structure of reversibly photoswitchable red fluorescent protein rsTagRFP== |
- | [[4kpi]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KPI OCA]. | + | <StructureSection load='4kpi' size='340' side='right'caption='[[4kpi]], [[Resolution|resolution]] 1.58Å' scene=''> |
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4kpi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KPI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KPI FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.58Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kpi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kpi OCA], [https://pdbe.org/4kpi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kpi RCSB], [https://www.ebi.ac.uk/pdbsum/4kpi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kpi ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/D0VX33_ENTQU D0VX33_ENTQU] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The rotational order-disorder (OD) structure of the reversibly photoswitchable fluorescent protein rsTagRFP is discussed in detail. The structure is composed of tetramers of 222 symmetry incorporated into the lattice in two different orientations rotated 90 degrees with respect to each other around the crystal c axis and with tetramer axes coinciding with the crystallographic twofold axes. The random distribution of alternatively oriented tetramers in the crystal creates the rotational OD structure with statistically averaged I422 symmetry. Despite order-disorder pathology, the structure of rsTagRFP has electron-density maps of good quality for both non-overlapping and overlapping parts of the model. The crystal contacts, crystal internal architecture and a possible mechanism of rotational OD crystal formation are discussed. | ||
- | + | The rotational order-disorder structure of the reversibly photoswitchable red fluorescent protein rsTagRFP.,Pletnev S, Subach FV, Verkhusha VV, Dauter Z Acta Crystallogr D Biol Crystallogr. 2014 Jan;70(Pt 1):31-9. doi:, 10.1107/S1399004713024644. Epub 2013 Dec 24. PMID:24419376<ref>PMID:24419376</ref> | |
- | <ref | + | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | [[Category: | + | <div class="pdbe-citations 4kpi" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | == References == |
- | [[Category: | + | <references/> |
- | + | __TOC__ | |
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Synthetic construct]] | ||
+ | [[Category: Pletnev S]] |
Current revision
Rotational order-disorder structure of reversibly photoswitchable red fluorescent protein rsTagRFP
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