3vss
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- | {{STRUCTURE_3vss| PDB=3vss | SCENE= }} | ||
- | ===Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain complexed with fructose=== | ||
- | {{ABSTRACT_PUBMED_23040392}} | ||
- | == | + | ==Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain complexed with fructose== |
- | [[3vss]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3vss' size='340' side='right'caption='[[3vss]], [[Resolution|resolution]] 1.97Å' scene=''> |
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3vss]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Microbacterium_saccharophilum Microbacterium saccharophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VSS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VSS FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vss FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vss OCA], [https://pdbe.org/3vss PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vss RCSB], [https://www.ebi.ac.uk/pdbsum/3vss PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vss ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q8VW87_9MICO Q8VW87_9MICO] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Arthrobacter sp. K-1 beta-fructofuranosidase (ArFFase), a glycoside hydrolase family 68 enzyme, catalyzes the hydrolysis and transfructosylation of sucrose. ArFFase is useful for producing a sweetener, lactosucrose (4(G)-beta-d-galactosylsucrose). The primary structure of ArFFase is homologous to those of levansucrases, although ArFFase catalyzes mostly hydrolysis when incubated with sucrose alone, even at high concentration. Here, we determined the crystal structure of ArFFase in unliganded form and complexed with fructose. ArFFase consisted of a five-bladed beta-propeller fold as observed in levansucrases. The structure of ArFFase was most similar to that of Gluconacetobacter diazotrophicus levansucrase (GdLev). The structure of the catalytic cleft of ArFFase was also highly homologous to that of GdLev. However, two amino acid residues, Tyr232 and Pro442 in ArFFase, were not conserved between them. A tunnel observed at the bottom of the catalytic cleft of ArFFase may serve as a water drain or its reservoir. | ||
- | + | Crystal structure of a lactosucrose-producing enzyme, Arthrobacter sp. K-1 beta-fructofuranosidase.,Tonozuka T, Tamaki A, Yokoi G, Miyazaki T, Ichikawa M, Nishikawa A, Ohta Y, Hidaka Y, Katayama K, Hatada Y, Ito T, Fujita K Enzyme Microb Technol. 2012 Dec 10;51(6-7):359-65. doi:, 10.1016/j.enzmictec.2012.08.004. Epub 2012 Aug 16. PMID:23040392<ref>PMID:23040392</ref> | |
- | <ref | + | |
- | [[Category: | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
- | [[Category: | + | </div> |
- | [[Category: Fujita | + | <div class="pdbe-citations 3vss" style="background-color:#fffaf0;"></div> |
- | [[Category: Hatada | + | == References == |
- | [[Category: Hidaka | + | <references/> |
- | [[Category: Ichikawa | + | __TOC__ |
- | [[Category: Ito | + | </StructureSection> |
- | [[Category: Katayama | + | [[Category: Large Structures]] |
- | [[Category: Miyazaki | + | [[Category: Microbacterium saccharophilum]] |
- | [[Category: Nishikawa | + | [[Category: Fujita K]] |
- | [[Category: Ohta | + | [[Category: Hatada Y]] |
- | [[Category: Tamaki | + | [[Category: Hidaka Y]] |
- | [[Category: Tonozuka | + | [[Category: Ichikawa M]] |
- | [[Category: Yokoi | + | [[Category: Ito T]] |
- | + | [[Category: Katayama K]] | |
- | + | [[Category: Miyazaki T]] | |
- | + | [[Category: Nishikawa A]] | |
+ | [[Category: Ohta Y]] | ||
+ | [[Category: Tamaki A]] | ||
+ | [[Category: Tonozuka T]] | ||
+ | [[Category: Yokoi G]] |
Current revision
Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain complexed with fructose
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Categories: Large Structures | Microbacterium saccharophilum | Fujita K | Hatada Y | Hidaka Y | Ichikawa M | Ito T | Katayama K | Miyazaki T | Nishikawa A | Ohta Y | Tamaki A | Tonozuka T | Yokoi G