4lvy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:22, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4lvy| PDB=4lvy | SCENE= }}
 
-
===Structure of the THF riboswitch bound to pemetrexed===
 
-
{{ABSTRACT_PUBMED_24388757}}
 
-
==About this Structure==
+
==Structure of the THF riboswitch bound to pemetrexed==
-
[[4lvy]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LVY OCA].
+
<StructureSection load='4lvy' size='340' side='right'caption='[[4lvy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4lvy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_mutans Streptococcus mutans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LVY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LVY FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LYA:2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC+ACID'>LYA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lvy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lvy OCA], [https://pdbe.org/4lvy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lvy RCSB], [https://www.ebi.ac.uk/pdbsum/4lvy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lvy ProSAT]</span></td></tr>
 +
</table>
-
==Reference==
+
==See Also==
-
<ref group="xtra">PMID:024388757</ref><references group="xtra"/><references/>
+
*[[Riboswitch 3D structures|Riboswitch 3D structures]]
-
[[Category: Batey, R T.]]
+
__TOC__
-
[[Category: Trausch, J J.]]
+
</StructureSection>
-
[[Category: Aptamer]]
+
[[Category: Large Structures]]
-
[[Category: Bacillus subtili]]
+
[[Category: Streptococcus mutans]]
-
[[Category: Bacterial]]
+
[[Category: Batey RT]]
-
[[Category: Bacterial protein]]
+
[[Category: Trausch JJ]]
-
[[Category: Base sequence]]
+
-
[[Category: Binding site]]
+
-
[[Category: Calorimetry]]
+
-
[[Category: Folic acid]]
+
-
[[Category: Gene expression regulation]]
+
-
[[Category: Genetic]]
+
-
[[Category: Guanine]]
+
-
[[Category: Leucovorin]]
+
-
[[Category: Ligand]]
+
-
[[Category: Magnesium]]
+
-
[[Category: Molecular sequence data]]
+
-
[[Category: Mrna]]
+
-
[[Category: Ncrna]]
+
-
[[Category: Nucleic acid conformation]]
+
-
[[Category: Nucleotide]]
+
-
[[Category: Pemetrexed binding]]
+
-
[[Category: Point mutation]]
+
-
[[Category: Protein binding]]
+
-
[[Category: Protein structure]]
+
-
[[Category: Pseudoknot]]
+
-
[[Category: Regulation]]
+
-
[[Category: Riboswitch]]
+
-
[[Category: Rna]]
+
-
[[Category: S-adenosylmethionine]]
+
-
[[Category: Secondary]]
+
-
[[Category: Streptococcus mutan]]
+
-
[[Category: Terminator region]]
+
-
[[Category: Tetrahydrofolate]]
+
-
[[Category: Thermodynamic]]
+
-
[[Category: Three-way junction]]
+
-
[[Category: Transcription]]
+

Current revision

Structure of the THF riboswitch bound to pemetrexed

PDB ID 4lvy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools