3nbc
From Proteopedia
(Difference between revisions)
(4 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | {{STRUCTURE_3nbc| PDB=3nbc | SCENE= }} | ||
- | ===Clitocybe nebularis ricin B-like lectin (CNL) in complex with lactose, crystallized at pH 4.4=== | ||
- | {{ABSTRACT_PUBMED_22298779}} | ||
- | == | + | ==Clitocybe nebularis ricin B-like lectin (CNL) in complex with lactose, crystallized at pH 4.4== |
- | [[3nbc]] is a 2 chain structure with sequence from [ | + | <StructureSection load='3nbc' size='340' side='right'caption='[[3nbc]], [[Resolution|resolution]] 1.01Å' scene=''> |
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3nbc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clitocybe_nebularis Clitocybe nebularis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NBC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NBC FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.01Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PRD_900004:beta-lactose'>PRD_900004</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nbc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nbc OCA], [https://pdbe.org/3nbc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nbc RCSB], [https://www.ebi.ac.uk/pdbsum/3nbc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nbc ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/CNL_CLINE CNL_CLINE] Lectin specific for terminal, non-reducing N-acetylgalactosamine (Gal-NAc)-containing carbohydrates including N,N'-diacetyllactosediamine/LDN (GalNAcbeta1-4GlcNAc, LacdiNAc). Specific also for carbohydrates containing N-acetylglucosamine (-GlcNAc) or N-acetyllactosamine (-Galbeta1-4GlcNAc) at the reducing end. Agglutinates human blood group A, AB, B and O erythrocytes with a strong preference for group A. Agglutinates bovine erythrocytes with a very low specificity (PubMed:19100814, PubMed:22298779). Binds carbohydrates bivalently, which is required for its biological activity (PubMed:22298779). Exhibits insecticidal activity against the fruit fly D.melanogaster, mosquito A.aegypti, and amoebozoa A.castellanii. Has anti-nutritional activity against Colorado potato beetle L.decemlineata, and against worm C.elegans (PubMed:21556921, PubMed:21486374). Has antiproliferative activity against human leukemic T-cells (PubMed:19100814). Has an immunostimulatory effect on human antigen-presenting dendritic cells, which are subsequently able to induce efficient T-cell immune responses (PubMed:22044067).<ref>PMID:19100814</ref> <ref>PMID:21486374</ref> <ref>PMID:21556921</ref> <ref>PMID:22044067</ref> <ref>PMID:22298779</ref> | ||
==See Also== | ==See Also== | ||
- | *[[Ricin|Ricin]] | + | *[[Ricin 3D structures|Ricin 3D structures]] |
- | + | == References == | |
- | == | + | <references/> |
- | + | __TOC__ | |
- | [[Category: | + | </StructureSection> |
- | [[Category: Kos | + | [[Category: Clitocybe nebularis]] |
- | [[Category: Pohleven | + | [[Category: Large Structures]] |
- | [[Category: Renko | + | [[Category: Kos J]] |
- | [[Category: Sabotic | + | [[Category: Pohleven J]] |
- | [[Category: Turk | + | [[Category: Renko M]] |
- | + | [[Category: Sabotic J]] | |
- | + | [[Category: Turk D]] | |
- | + |
Current revision
Clitocybe nebularis ricin B-like lectin (CNL) in complex with lactose, crystallized at pH 4.4
|