4n5c

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{{Large structure}}
 
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{{STRUCTURE_4n5c| PDB=4n5c | SCENE= }}
 
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===Crystal structure of Ypp1===
 
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{{ABSTRACT_PUBMED_24360784}}
 
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==Function==
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==Crystal structure of Ypp1==
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[[http://www.uniprot.org/uniprot/YPP1_YEAST YPP1_YEAST]] Involved in endocytosis.<ref>PMID:17576801</ref>
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<StructureSection load='4n5c' size='340' side='right'caption='[[4n5c]], [[Resolution|resolution]] 3.25&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4n5c]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N5C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4N5C FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.25&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4n5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4n5c OCA], [https://pdbe.org/4n5c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4n5c RCSB], [https://www.ebi.ac.uk/pdbsum/4n5c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4n5c ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/YPP1_YEAST YPP1_YEAST] Involved in endocytosis.<ref>PMID:17576801</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Plasma membrane PI4P helps determine the identity of this membrane and plays a key role in signal transduction as the precursor of PI(4,5)P2 and its metabolites. Here, we report the atomic structure of the protein scaffold that is required for the plasma membrane localization and function of Stt4/PI4KIIIalpha, the PI 4-kinase responsible for this PI4P pool. Both proteins of the scaffold, Efr3 and YPP1/TTC7, are composed of alpha-helical repeats, which are arranged into a rod in Efr3 and a superhelix in Ypp1. A conserved basic patch in Efr3, which binds acidic phospholipids, anchors the complex to the plasma membrane. Stt4/PI4KIIIalpha is recruited by interacting with the Ypp1 C-terminal lobe, which also binds to unstructured regions in the Efr3 C terminus. Phosphorylation of this Efr3 region counteracts Ypp1 binding, thus providing a mechanism through which Stt4/PI4KIIIalpha recruitment, and thus a metabolic reaction of fundamental importance in cell physiology, can be regulated.
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==About this Structure==
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Structural insights into assembly and regulation of the plasma membrane phosphatidylinositol 4-kinase complex.,Wu X, Chi RJ, Baskin JM, Lucast L, Burd CG, De Camilli P, Reinisch KM Dev Cell. 2014 Jan 13;28(1):19-29. doi: 10.1016/j.devcel.2013.11.012. Epub 2013, Dec 19. PMID:24360784<ref>PMID:24360784</ref>
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[[4n5c]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N5C OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:024360784</ref><references group="xtra"/><references/>
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</div>
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[[Category: Baskin, J M.]]
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<div class="pdbe-citations 4n5c" style="background-color:#fffaf0;"></div>
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[[Category: Burd, C G.]]
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== References ==
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[[Category: Camilli, P De.]]
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<references/>
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[[Category: Chi, R J.]]
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__TOC__
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[[Category: Lucast, L.]]
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</StructureSection>
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[[Category: Reinisch, K M.]]
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[[Category: Large Structures]]
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[[Category: Wu, X.]]
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[[Category: Saccharomyces cerevisiae S288C]]
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[[Category: Component of stt4 complex]]
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[[Category: Baskin JM]]
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[[Category: Efr3]]
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[[Category: Burd CG]]
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[[Category: Heat-like repeat]]
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[[Category: Chi RJ]]
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[[Category: Plasma membrane]]
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[[Category: De Camilli P]]
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[[Category: Protein binding]]
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[[Category: Lucast L]]
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[[Category: Stt4]]
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[[Category: Reinisch KM]]
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[[Category: Wu X]]

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Crystal structure of Ypp1

PDB ID 4n5c

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