Highlighted Proteins of Lyme Disease

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<StructureSection load='1ggq' size='350' side='right' caption='' scene=''>
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<StructureSection load='1ggq' size='350' side='right' caption='OspC protein (PDB code [[1ggq]]).' scene=''>
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[[Image:BorreliaGeneExpressionCycle.png|500px|right|thumb|<b>Figure 1: Abundance of Highlighted Proteins Over <i>Borrelia</i> Life Cycle.</b>]]
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[[Image:BorreliaGeneExpressionCycle.png|300px|right|thumb|<b>Figure 1: Abundance of Highlighted Proteins Over <i>Borrelia</i> Life Cycle.</b>]]
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[http://en.wikipedia.org/wiki/Lyme_disease Lyme disease] is caused by three species of bacteria belonging to the genus <i>Borrelia</i>.<ref>PMID: 7043737</ref><ref>PMID: 6828119 </ref> <i>Borrelia burgdorferi</i>, an obligate parasite, is the most common cause of the disease in the United States and is transmitted via hard-bodied ticks of the [http://en.wikipedia.org/wiki/Ixodidae <i>Ixodidae</i>] family, commonly known as the blacklegged or deer ticks. <i>Borrelia</i> spirochetes are motile, helical bacteria whose cell membranes have many exposed, surface lipoproteins that are involved in both the pathogenesis and life cycle of the parasite. Two predominant groups of the surface lipoproteins present are classified as outer surface proteins (Osps), which have been characterized as Osps A through F, and the variable major protein-like sequence expressed (VlsE). Both of these groups of outer surface proteins play important roles in both the pathogenesis and life cycle of <i>Borrelia</i> as well as roles in eliciting an immune response within the host organism (Figure 1).<ref name="connolly">PMID: 15864264</ref>
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[http://en.wikipedia.org/wiki/Lyme_disease]
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Lyme disease is caused by three species of bacteria belonging to the genus <i>Borrelia</i>.<ref>PMID: 7043737</ref><ref>PMID: 6828119 </ref> <i>Borrelia burgdorferi</i>, an obligate parasite, is the most common cause of the disease in the United States and is transmitted via hard-bodied ticks of the [http://en.wikipedia.org/wiki/Ixodidae <i>Ixodidae</i>] family, commonly known as the blacklegged or deer ticks. <i>Borrelia</i> spirochetes are motile, helical bacteria whose cell membranes have many exposed, surface lipoproteins that are involved in both the pathogenesis and life cycle of the parasite. Two predominant groups of the surface lipoproteins present are classified as outer surface proteins (Osps), which have been characterized as Osps A through F, and the variable major protein-like sequence expressed (VlsE). Both of these groups of outer surface proteins play important roles in both the pathogenesis and life cycle of <i>Borrelia</i> as well as roles in eliciting an immune response within the host organism (Figure 1).<ref name="connolly">PMID: 15864264</ref>
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While most of the OspC locus is highly variable, the sequence alignment of all oMGs reveals that the surface-exposed residues towards the membrane-proximal end of two of the helices, α1 and α5, are highly <scene name='Studio:G4SecL04/Conserved_region/1'>conserved</scene> and have a positively charged surface. Other than those regions of the α1 and α5 helices, the surface-exposed residues on the remaining regions of the OspC molecule are variable.<ref name= variable>PMID: 11139584 </ref>
While most of the OspC locus is highly variable, the sequence alignment of all oMGs reveals that the surface-exposed residues towards the membrane-proximal end of two of the helices, α1 and α5, are highly <scene name='Studio:G4SecL04/Conserved_region/1'>conserved</scene> and have a positively charged surface. Other than those regions of the α1 and α5 helices, the surface-exposed residues on the remaining regions of the OspC molecule are variable.<ref name= variable>PMID: 11139584 </ref>
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{{Template:ColorKey_ConSurf_NoYellow}}
 
<h4>OspC Structure and Antigenicity</h4>
<h4>OspC Structure and Antigenicity</h4>
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<scene name='Studio:G4SecL04/L6/3'>L6</scene> (residues 161-169). The surface potential of the red region that projects away from the membrane is negatively charged and primarily involved in the protein-protein or protein-ligand interactions.<ref name= variable>PMID: 11139584 </ref> Only four types of invasive oMG strains (A, B, I and K), whose surface potential in the red region is highly negative relative to non-invasive strains, play a major role in pathogenesis of human Lyme disease. <ref name=kumaran>PMID:11230121</ref>The <scene name='Studio:G4SecL04/His_82/1'>His82</scene> residue, located in the red region at the distal, membrane end, is unique in that replacing this residue with other residues, with the exception of Lys82 and Gln82, which are only present in four invasive oMG strains, enhances the possibility of turning invasive strains into non-invasive strains. Thus, the stronger the negative electrostatic potential in the red region, the higher the chance OspC will to bind with positively charged host ligands; therefore, the altering of an amino acid residue at the 82<sup>nd</sup> position in the red region determines OspC polymorphism and demonstrates how this is connected to virulence and invasiveness.<ref name=kumaran>PMID:11230121</ref>
<scene name='Studio:G4SecL04/L6/3'>L6</scene> (residues 161-169). The surface potential of the red region that projects away from the membrane is negatively charged and primarily involved in the protein-protein or protein-ligand interactions.<ref name= variable>PMID: 11139584 </ref> Only four types of invasive oMG strains (A, B, I and K), whose surface potential in the red region is highly negative relative to non-invasive strains, play a major role in pathogenesis of human Lyme disease. <ref name=kumaran>PMID:11230121</ref>The <scene name='Studio:G4SecL04/His_82/1'>His82</scene> residue, located in the red region at the distal, membrane end, is unique in that replacing this residue with other residues, with the exception of Lys82 and Gln82, which are only present in four invasive oMG strains, enhances the possibility of turning invasive strains into non-invasive strains. Thus, the stronger the negative electrostatic potential in the red region, the higher the chance OspC will to bind with positively charged host ligands; therefore, the altering of an amino acid residue at the 82<sup>nd</sup> position in the red region determines OspC polymorphism and demonstrates how this is connected to virulence and invasiveness.<ref name=kumaran>PMID:11230121</ref>
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<h3>Lyme Disease and Ecology</h3>
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<h3>OspC, Lyme Disease, and Ecology</h3>
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[[Image:Life cycle of tick.png|300px|right|thumb|<b>Figure 3: A Diagram of the Life Cycle of the Blacklegged Tick.</b>[[http://www.cdc.gov/ticks/life_cycle_and_hosts.html]]]]
[[Image:Life cycle of tick.png|300px|right|thumb|<b>Figure 3: A Diagram of the Life Cycle of the Blacklegged Tick.</b>[[http://www.cdc.gov/ticks/life_cycle_and_hosts.html]]]]
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<h3>Potential Mechanism of Lysis</h3>
<h3>Potential Mechanism of Lysis</h3>
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CB2 Fab binding destabilizes the [http://en.wikipedia.org/wiki/Bacterial_outer_membrane outer membrane] (OM) of <i>B. burgdorferi</i>, with subsequent formation of [http://en.wikipedia.org/wiki/Spheroplast spheroplasts]. Throught the use of single chaine variable fragment (scFv) of a related complement-independent bactericidal antibody, the bactericidal activity of these antibodies has been shown to reside in the antibody variable region alone.<ref>PMID: 18424744</ref> It has been observed that the bactericidal action, but not the binding, requires the presence of divalent cations (Mg<sup>2+</sup> and Ca<sup>2+</sup>), and the CB2-bound Fab is unable to clear bacteria in the absence of these cations.<ref name=ding /> Once CB2 binds to OspB, it leads to the lysis of the bacterial cell (<i>B. burgdorferi</i>) through membrane/vesicle removal.<ref>PMID: 19549817</ref> Eventually, enough membrane is lost, leading to the creation of physical openings in the OM of a defined size around the entire cell - increasing permeability and allowing for a rapid infusion of electrolytes which then leads to osmotic lysis of the organisms.<ref>PMID: 19549817</ref>
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CB2 Fab binding destabilizes the [http://en.wikipedia.org/wiki/Bacterial_outer_membrane outer membrane] (OM) of <i>B. burgdorferi</i>, with subsequent formation of [http://en.wikipedia.org/wiki/Spheroplast spheroplasts]. Through the use of single chain variable fragment (scFv) of a related complement-independent bactericidal antibody, the bactericidal activity of these antibodies has been shown to reside in the antibody variable region alone.<ref>PMID: 18424744</ref> It has been observed that the bactericidal action, but not the binding, requires the presence of divalent cations (Mg<sup>2+</sup> and Ca<sup>2+</sup>), and the CB2-bound Fab is unable to clear bacteria in the absence of these cations.<ref name=ding /> Once CB2 binds to OspB, it leads to the lysis of the bacterial cell (<i>B. burgdorferi</i>) through membrane/vesicle removal.<ref>PMID: 19549817</ref> Eventually, enough membrane is lost, leading to the creation of physical openings in the OM of a defined size around the entire cell - increasing permeability and allowing for a rapid infusion of electrolytes which then leads to osmotic lysis of the organisms.<ref>PMID: 19549817</ref>
Interestingly, cholesterol and prokaryotic lipid rafts are critical for the bactericidal mechanism of CB2.<ref>PMID: 20951967</ref> It is unusual for prokaryotic organisms to have membrane cholesterol and <i>Borrelia</i> is one of the few that does have this sterol.<ref>PMID: 12799465</ref><ref>PMID: 12810705</ref> Indeed as is the case in eukaryotic cells, the presence of cholesterol in the <i>Borrelia</i> membrane leads to the formation of distinct membrane microdomains called [http://en.wikipedia.org/wiki/Lipid_raft lipid rafts].<ref>PMID: 20951967</ref><ref>PMID: 23696733</ref> The prokaryotic lipid rafts of <i>Borrelia</i> share the biochemical and biophysical characteristics of eukaryotic lipid rafts.<ref>PMID: 23696733</ref> In eukaryotes, lipid rafts are specialized membrane platforms that serve a critical role in cell signaling.<ref>PMID: 22488962</ref> The dependence on the presence of cholesterol for the bactericidal mechanism of CB2 suggests that the prokaryotic lipid rafts of <i>Borrelia</i> are necessary for the bactericidal effect of complement-independent antibodies. It is speculated that lipid rafts may contribute to this bactericidal mechanism by enhancing OspB coalescence and membrane blebbing/removal. Additionally, enhance coalescence of OspB due to the presence of lipid raft interactions may trigger a cell-signaling pathway that is required for the bactericidal effect of complement-independent antibodies.<ref>PMID: 20951967</ref> This idea, however, is speculative. Interestingly, the binding of CB2 to OspB results in changes in gene expression in <i>B. burgdorferi</i><ref>PMID: 15039324</ref> which could be suggestive of cell signaling. In particular, there were dramatic changes in the expression of phage holins genes, which could conceivably result in the assembly of bacteriophages that could attack the <i>Borrelia</i> membrane internally.
Interestingly, cholesterol and prokaryotic lipid rafts are critical for the bactericidal mechanism of CB2.<ref>PMID: 20951967</ref> It is unusual for prokaryotic organisms to have membrane cholesterol and <i>Borrelia</i> is one of the few that does have this sterol.<ref>PMID: 12799465</ref><ref>PMID: 12810705</ref> Indeed as is the case in eukaryotic cells, the presence of cholesterol in the <i>Borrelia</i> membrane leads to the formation of distinct membrane microdomains called [http://en.wikipedia.org/wiki/Lipid_raft lipid rafts].<ref>PMID: 20951967</ref><ref>PMID: 23696733</ref> The prokaryotic lipid rafts of <i>Borrelia</i> share the biochemical and biophysical characteristics of eukaryotic lipid rafts.<ref>PMID: 23696733</ref> In eukaryotes, lipid rafts are specialized membrane platforms that serve a critical role in cell signaling.<ref>PMID: 22488962</ref> The dependence on the presence of cholesterol for the bactericidal mechanism of CB2 suggests that the prokaryotic lipid rafts of <i>Borrelia</i> are necessary for the bactericidal effect of complement-independent antibodies. It is speculated that lipid rafts may contribute to this bactericidal mechanism by enhancing OspB coalescence and membrane blebbing/removal. Additionally, enhance coalescence of OspB due to the presence of lipid raft interactions may trigger a cell-signaling pathway that is required for the bactericidal effect of complement-independent antibodies.<ref>PMID: 20951967</ref> This idea, however, is speculative. Interestingly, the binding of CB2 to OspB results in changes in gene expression in <i>B. burgdorferi</i><ref>PMID: 15039324</ref> which could be suggestive of cell signaling. In particular, there were dramatic changes in the expression of phage holins genes, which could conceivably result in the assembly of bacteriophages that could attack the <i>Borrelia</i> membrane internally.
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[[Image: Cataly.png|300px|right|thumb|<b>Figure 6: Comparison of the Compositions of the OspB and a Serine Protease Catalytic Triads</b>]]
[[Image: Cataly.png|300px|right|thumb|<b>Figure 6: Comparison of the Compositions of the OspB and a Serine Protease Catalytic Triads</b>]]
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The mechanism by which CB2 and H6831 Fab fragments destroy a spirochete appears to be a novel interaction. It is possible that Fab binding changes the properties of OspB folding, which may increase sensitivity of the protein to proteolysis or aggregation. NMR methods have shown that the effects of binding can be sent to regions of the antigen distant from the epitope, which is at the <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_rainbow/1'>C-terminus</scene> shown in red (N-terminus in blue). OspB shows signs of truncation after interacting with Fab of H6831 <ref>PMID: 1382591</ref>. Truncated OspBs cease within the two C-terminal beta-strands of the central sheet. H6831 disorders or removes a beta sheet from OspB after binding, and cleavage may be a possible explanation for the conformational changes of OspB.<ref>PMID: 7505260</ref> In <b>H6831-free</b> and <b>H6831-bound</b> forms of OspB, some changes result from proteolysis near the N-terminus.<sup>[15]</sup> Residues 157-201 on OspB contain the <b>cleaved region</b>, shown in pink.<ref>PMID: 15713683</ref>
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The mechanism by which CB2 and H6831 Fab fragments destroy a spirochete appears to be a novel interaction. It is possible that Fab binding changes the properties of OspB folding, which may increase sensitivity of the protein to proteolysis or aggregation. NMR methods have shown that the effects of binding can be sent to regions of the antigen distant from the epitope, which is at the <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_rainbow/1'>C-terminus</scene> shown in red (N-terminus in blue). OspB shows signs of truncation after interacting with Fab of H6831 <ref>PMID: 1382591</ref>. Truncated OspBs cease within the two C-terminal beta-strands of the central sheet. H6831 disorders or removes a beta sheet from OspB after binding, and cleavage may be a possible explanation for the conformational changes of OspB.<ref>PMID: 7505260</ref>
It is quite possible that OspB performs an autoproteolysis. There is a set of <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_cat_triad_cool/9'>three residues</scene> found on OspB that resembles the catalytic triad of [http://proteopedia.org/wiki/index.php/Serine_Proteases serine proteases]. This "constellation" consists of Thr166, Arg162, and Glu184 - similar to the catalytic triad residues of the serine protease [[trypsin]], which are Ser195, His57, and Asp102.<ref> PMID:12475199</ref> Threonine and Glutamic acid are found in other catalytic triads of the serine hydrolase family, but arginine seems unlikely to replace histidine as a base due to its higher pKa. There have been studies that have shown that arginine is essential for other enzymatic functions, such as in the Ser-Arg-Asp catalytic triad in cytosolic phospholipase A2 and as a catalytic base in Sortase A. <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_asn164/1'>Asn164</scene> forms an hydrogen bond with <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_asn164/2'>Thr166</scene> and may rearrange to form a putative oxyanion hole with Thr166 and another unidentified atom if active in the catalysis. A concerted proton transfer, similar to a “proton wire”, is one plausible mechanism that would allow arginine to function in the catalytic triad of a protease.
It is quite possible that OspB performs an autoproteolysis. There is a set of <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_cat_triad_cool/9'>three residues</scene> found on OspB that resembles the catalytic triad of [http://proteopedia.org/wiki/index.php/Serine_Proteases serine proteases]. This "constellation" consists of Thr166, Arg162, and Glu184 - similar to the catalytic triad residues of the serine protease [[trypsin]], which are Ser195, His57, and Asp102.<ref> PMID:12475199</ref> Threonine and Glutamic acid are found in other catalytic triads of the serine hydrolase family, but arginine seems unlikely to replace histidine as a base due to its higher pKa. There have been studies that have shown that arginine is essential for other enzymatic functions, such as in the Ser-Arg-Asp catalytic triad in cytosolic phospholipase A2 and as a catalytic base in Sortase A. <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_asn164/1'>Asn164</scene> forms an hydrogen bond with <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_asn164/2'>Thr166</scene> and may rearrange to form a putative oxyanion hole with Thr166 and another unidentified atom if active in the catalysis. A concerted proton transfer, similar to a “proton wire”, is one plausible mechanism that would allow arginine to function in the catalytic triad of a protease.
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It is not fully understood how <i>B. burgdorferi</i> get past the [http://en.wikipedia.org/wiki/Blood-brain_barrier blood-brain barrier] composed of microvascular endohelial cells, among other cells, though some researchers suggest a paracellular route, which involves a process using transient tether-type associations involving OspA. . Studies have shown that OspA adheres to brain microvascular cells by binding to the [[1aly|CD40]] receptors, followed by an induction of signaling cascades and adhesion to endothelial cells, ultimately resulting in the movement of <i>B. burgdorferi</i> into the CNS. Similar cell signaling events are seen when leukocytes cross the blood-brain barrier, and it has been proposed that <i>B. burgdorferi</i> may mimic this process, although it has been found that not all strains of <i>B. burgdorferi</i> can utilize OspA to cross into the CNS. It has been found that OspA only contributes about 70% to adherence, and other <i>B. burgdorferi</i> proteins are also needed in this process; it has also been seen that OspA mediates the adhesion of <i>B. burgdorferi</i> to murine neural and glial cell lines. <ref name="pulzova">PMID: 22355605</ref>
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It is not fully understood how <i>B. burgdorferi</i> get past the [http://en.wikipedia.org/wiki/Blood-brain_barrier blood-brain barrier] composed of microvascular endohelial cells, among other cells, though some researchers suggest a paracellular route, which involves a process using transient tether-type associations involving OspA. Studies have shown that OspA adheres to brain microvascular cells by binding to the [[1aly|CD40]] receptors, followed by an induction of signaling cascades and adhesion to endothelial cells, ultimately resulting in the movement of <i>B. burgdorferi</i> into the CNS. Similar cell signaling events are seen when leukocytes cross the blood-brain barrier, and it has been proposed that <i>B. burgdorferi</i> may mimic this process, although it has been found that not all strains of <i>B. burgdorferi</i> can utilize OspA to cross into the CNS. It has been found that OspA only contributes about 70% to adherence, and other <i>B. burgdorferi</i> proteins are also needed in this process; it has also been seen that OspA mediates the adhesion of <i>B. burgdorferi</i> to murine neural and glial cell lines. <ref name="pulzova">PMID: 22355605</ref>
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<h4>Interaction between OspA and LA-2</h4>
<h4>Interaction between OspA and LA-2</h4>
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LA-2 of the <scene name='Studio:G1SecL01/2/1'> OspA-LA2 Complex</scene> is a murine, monoclonal IgG antibody that interacts with <scene name='Studio:G1SecL01/2/2'> three exposed loops </scene> on the C-terminal of OspA. These interactions include eight direct [[hydrogen bonds]], four solvent-bridged hydrogen bonds, three ion pairs, and numerous van der Waals interactions.<ref name=ding /> This particular antibody is being used in vaccine development, and it is important to not that LA-2 depends on complement in order to create a bactericidal effect against <i>B. burgdorferi</i>.
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LA-2 of the <scene name='Studio:G1SecL01/2/1'> OspA-LA2 Complex</scene> is a murine, monoclonal IgG antibody that interacts with <scene name='Studio:G1SecL01/2/2'> three exposed loops </scene> on the C-terminal of OspA. These interactions include eight direct [[hydrogen bonds]], four solvent-bridged hydrogen bonds, three ion pairs, and numerous van der Waals interactions.<ref name=ding /> This particular antibody is being used in vaccine development, and it is important to note that LA-2 depends on complement in order to create a bactericidal effect against <i>B. burgdorferi</i>.
<h5>Structural changes to OspA in the complexed form</h5>
<h5>Structural changes to OspA in the complexed form</h5>
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OspB: Olivia Cheng, Stephanie Maung, Ying Zhao<br>
OspB: Olivia Cheng, Stephanie Maung, Ying Zhao<br>
VlsE: Frank J. Albergo, Rachel Cirineo, Tanya Turkewitz<br>
VlsE: Frank J. Albergo, Rachel Cirineo, Tanya Turkewitz<br>
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Editors, teachers: Jeff Ecklund, Joan M. Miyazaki, Christopher Morales, Carol Nicosia, Deborah A. Spikes, Raymond Suhandynata, La Zhong, Jonathan Manit Wyrick<br>
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Editors, teachers: Jeff Ecklund, Joan M. Miyazaki, Christopher Morales, Carol Nicosia, Deborah A. Spikes, Raymond Suhandynata, Jonathan Manit Wyrick, La Zhong, <br>
Technical support: Nancy A. Black, Jameson T. Crowley<br>
Technical support: Nancy A. Black, Jameson T. Crowley<br>
Collaborating research scientists, editors: Jorge L. Benach, Timothy J. LaRocca<br>
Collaborating research scientists, editors: Jorge L. Benach, Timothy J. LaRocca<br>

Current revision

OspC protein (PDB code 1ggq).

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Proteopedia Page Authors

Safa Abdelhakim, Frank J. Albergo, Irene Chen, Olivia Cheng, Rachel Cirineo, Jenny Kim Kim, Alexandros Konstantinidis, Cara Lin, Stephanie Maung, Christopher Morales, Andrea Mullen, Niamh B. O'Hara, Marvin H. O'Neal III, Philip J. Pipitone, Kimberly Slade, Christopher Smilios, Raymond Suhandynata, Khine Tun, Tanya Turkewitz, Ying Zhao, La Zhong, Jonathan Manit Wyrick.

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