2ef8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2ef8" size="350" color="white" frame="true" align="right" spinBox="true" caption="2ef8, resolution 1.95&Aring;" /> '''Crystal structure of...)
Current revision (00:53, 21 November 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ef8.jpg|left|200px]]<br /><applet load="2ef8" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2ef8, resolution 1.95&Aring;" />
 
-
'''Crystal structure of C.EcoT38IS'''<br />
 
-
==About this Structure==
+
==Crystal structure of C.EcoT38IS==
-
2EF8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Leuconostoc_phage_p37 Leuconostoc phage p37] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Site: <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+A+401'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EF8 OCA].
+
<StructureSection load='2ef8' size='340' side='right'caption='[[2ef8]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
[[Category: Leuconostoc phage p37]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2ef8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_P2 Escherichia virus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EF8 FirstGlance]. <br>
-
[[Category: Kawanishi, Y.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
[[Category: Kita, K.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: Mikami, B.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ef8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ef8 OCA], [https://pdbe.org/2ef8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ef8 RCSB], [https://www.ebi.ac.uk/pdbsum/2ef8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ef8 ProSAT]</span></td></tr>
-
[[Category: SO4]]
+
</table>
-
[[Category: dna binding protein]]
+
== Function ==
-
[[Category: helix-turn-helix]]
+
[https://www.uniprot.org/uniprot/Q83VS9_9CAUD Q83VS9_9CAUD]
-
[[Category: transcription regulator]]
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 27 07:57:54 2008''
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ef/2ef8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ef8 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Escherichia virus P2]]
 +
[[Category: Large Structures]]
 +
[[Category: Kawanishi Y]]
 +
[[Category: Kita K]]
 +
[[Category: Mikami B]]

Current revision

Crystal structure of C.EcoT38IS

PDB ID 2ef8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools