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2x3t
From Proteopedia
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| - | {{STRUCTURE_2x3t| PDB=2x3t | SCENE= }} | ||
| - | ===Glutaraldehyde-crosslinked wheat germ agglutinin isolectin 1 crystal soaked with a synthetic glycopeptide=== | ||
| - | {{ABSTRACT_PUBMED_20527753}} | ||
| - | == | + | ==Glutaraldehyde-crosslinked wheat germ agglutinin isolectin 1 crystal soaked with a synthetic glycopeptide== |
| - | [[http://www.uniprot.org/uniprot/AGI1_WHEAT AGI1_WHEAT | + | <StructureSection load='2x3t' size='340' side='right'caption='[[2x3t]], [[Resolution|resolution]] 2.75Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2x3t]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X3T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X3T FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.749Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BAL:BETA-ALANINE'>BAL</scene>, <scene name='pdbligand=DBB:D-ALPHA-AMINOBUTYRIC+ACID'>DBB</scene>, <scene name='pdbligand=DVA:D-VALINE'>DVA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GYV:2-(ACETYLAMINO)-1-O-CARBAMOYL-2-DEOXY-ALPHA-D-GLUCOPYRANOSE'>GYV</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x3t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x3t OCA], [https://pdbe.org/2x3t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x3t RCSB], [https://www.ebi.ac.uk/pdbsum/2x3t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x3t ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/AGI1_WHEAT AGI1_WHEAT] N-acetyl-D-glucosamine / N-acetyl-D-neuraminic acid binding lectin. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x3/2x3t_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2x3t ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | [[ | + | *[[Agglutinin 3D structures|Agglutinin 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Large Structures]] | |
| + | [[Category: Synthetic construct]] | ||
[[Category: Triticum aestivum]] | [[Category: Triticum aestivum]] | ||
| - | [[Category: Diederichs | + | [[Category: Diederichs K]] |
| - | [[Category: Maierhofer | + | [[Category: Maierhofer C]] |
| - | [[Category: Schwefel | + | [[Category: Schwefel D]] |
| - | [[Category: Welte | + | [[Category: Welte W]] |
| - | [[Category: Wittmann | + | [[Category: Wittmann V]] |
| - | + | ||
| - | + | ||
Current revision
Glutaraldehyde-crosslinked wheat germ agglutinin isolectin 1 crystal soaked with a synthetic glycopeptide
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