3ppr
From Proteopedia
(Difference between revisions)
												
			
			| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3ppr|  PDB=3ppr  |  SCENE=  }}  | ||
| - | ===Structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of Bacillus subtilis ABC transporter OpuC=== | ||
| - | {{ABSTRACT_PUBMED_21366542}} | ||
| - | == | + | ==Structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of Bacillus subtilis ABC transporter OpuC== | 
| - | [[http://www.uniprot.org/uniprot/OPUCC_BACSU OPUCC_BACSU | + | <StructureSection load='3ppr' size='340' side='right'caption='[[3ppr]], [[Resolution|resolution]] 2.10Å' scene=''> | 
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3ppr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PPR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PPR FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4CS:(4S)-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC+ACID'>4CS</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ppr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ppr OCA], [https://pdbe.org/3ppr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ppr RCSB], [https://www.ebi.ac.uk/pdbsum/3ppr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ppr ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/OPUCC_BACSU OPUCC_BACSU] Member of a high affinity multicomponent binding-protein-dependent transport system for glycine betaine, carnitine, and choline.<ref>PMID:10216873</ref> <ref>PMID:8752321</ref>  | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The compatible solute ATP-binding cassette (ABC) transporters are indispensable for acquiring a variety of compatible solutes under osmotic stress in Bacillus subtilis. The substrate-binding protein OpuCC of the ABC transporter OpuC can recognize a broad spectrum of compatible solutes, compared to its 70% sequence-identical paralog OpuBC that can solely bind choline. To explore the structural basis of this difference of substrate specificity, we determined crystal structures of OpuCC in the apo-form and in complex with carnitine, glycine betaine, choline and ectoine, respectively. OpuCC is composed of two alpha/beta/alpha globular sandwich domains linked by two hinge regions, with substrate-binding pocket located at the inter-domain cleft. Upon substrate-binding, the two domains shift towards each other to trap the substrate. Comparative structural analysis revealed a plastic pocket that fits various compatible solutes, which attributes the multiple-substrate binding property to OpuCC. This plasticity is a gain-of-function via a single-residue mutation of Thr94 in OpuCC versus Asp96 in OpuBC. | ||
| - | + | Structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of Bacillus subtilis ABC transporter OpuC.,Du Y, Shi WW, He YX, Yang YH, Zhou CZ, Chen Y Biochem J. 2011 Mar 3. PMID:21366542<ref>PMID:21366542</ref> | |
| - | + | ||
| - | == | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | 
| - | + | </div> | |
| + | <div class="pdbe-citations 3ppr" style="background-color:#fffaf0;"></div> | ||
| - | == | + | ==See Also== | 
| - | + | *[[ABC transporter 3D structures|ABC transporter 3D structures]] | |
| - | [[Category: Bacillus  | + | == References == | 
| - | [[Category:  | + | <references/> | 
| - | [[Category:  | + | __TOC__ | 
| - | [[Category:  | + | </StructureSection> | 
| - | [[Category:  | + | [[Category: Bacillus subtilis]] | 
| - | [[Category:  | + | [[Category: Large Structures]] | 
| - | [[Category:  | + | [[Category: Chen Y]] | 
| - | [[Category:  | + | [[Category: Du Y]] | 
| - | + | [[Category: He YX]] | |
| - | + | [[Category: Shi WW]] | |
| + | [[Category: Yang YH]] | ||
| + | [[Category: Zhou CZ]] | ||
Current revision
Structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of Bacillus subtilis ABC transporter OpuC
| 
 | |||||||||||
Categories: Bacillus subtilis | Large Structures | Chen Y | Du Y | He YX | Shi WW | Yang YH | Zhou CZ
