4p16

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'''Unreleased structure'''
 
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The entry 4p16 is ON HOLD until Paper Publication
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==Crystal structure of the papain-like protease of Middle-East Respiratory Syndrome coronavirus==
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<StructureSection load='4p16' size='340' side='right'caption='[[4p16]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4p16]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_betacoronavirus_2c_EMC/2012 Human betacoronavirus 2c EMC/2012]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P16 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P16 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p16 OCA], [https://pdbe.org/4p16 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p16 RCSB], [https://www.ebi.ac.uk/pdbsum/4p16 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p16 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/K0BWD0_MERS K0BWD0_MERS]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The Middle-East Respiratory Syndrome coronavirus (MERS-CoV) causes severe acute pneumonia and renal failure. The MERS-CoV papain-like protease (PLpro) is a potential target for the development of antiviral drugs. To facilitate these efforts, we determined the three-dimensional structure of the enzyme by X-ray crystallography. The molecule consists of a ubiquitin-like domain and a catalytic core domain. The catalytic domain displays an extended right-hand fold with a zinc ribbon and embraces a solvent-exposed substrate-binding region. The overall structure of the MERS-CoV PLpro is similar to that of the corresponding SARS-CoV enzyme, but the architecture of the oxyanion hole and of the S3 as well as the S5 specificity sites differ from the latter. These differences are the likely reason for reduced in vitro peptide hydrolysis and deubiquitinating activities of the MERS-CoV PLpro, compared to the homologous enzyme from the SARS coronavirus. Introduction of a side-chain capable of oxyanion stabilization through the Leu106Trp mutation greatly enhances the in vitro catalytic activity of the MERS-CoV PLpro. The unique features observed in the crystal structure of the MERS-CoV PLpro should allow the design of antivirals that would not interfere with host ubiquitin-specific proteases.
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Authors: Lei, J., Mesters, J.R., Ma, Q., Hilgenfeld, R.
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Crystal structure of the papain-like protease of MERS coronavirus reveals unusual, potentially druggable active-site features.,Lei J, Mesters JR, Drosten C, Anemuller S, Ma Q, Hilgenfeld R Antiviral Res. 2014 Jun 30;109C:72-82. doi: 10.1016/j.antiviral.2014.06.011. PMID:24992731<ref>PMID:24992731</ref>
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Description: Crystal structure of the papain-like protease of Middle-East Respiratory Syndrome coronavirus
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4p16" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Human betacoronavirus 2c EMC/2012]]
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[[Category: Large Structures]]
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[[Category: Hilgenfeld R]]
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[[Category: Lei J]]
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[[Category: Ma Q]]
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[[Category: Mesters JR]]

Current revision

Crystal structure of the papain-like protease of Middle-East Respiratory Syndrome coronavirus

PDB ID 4p16

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