4nd6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:32, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4nd6| PDB=4nd6 | SCENE= }}
 
-
===Crystal structure of apo 3-nitro-tyrosine tRNA synthetase (5B) in the open form===
 
-
{{ABSTRACT_PUBMED_24611875}}
 
-
==Function==
+
==Crystal structure of apo 3-nitro-tyrosine tRNA synthetase (5B) in the open form==
-
[[http://www.uniprot.org/uniprot/SYY_METJA SYY_METJA]] Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).<ref>PMID:10585437</ref>
+
<StructureSection load='4nd6' size='340' side='right'caption='[[4nd6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4nd6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ND6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ND6 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nd6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nd6 OCA], [https://pdbe.org/4nd6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nd6 RCSB], [https://www.ebi.ac.uk/pdbsum/4nd6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nd6 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SYY_METJA SYY_METJA] Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).<ref>PMID:10585437</ref>
-
==About this Structure==
+
==See Also==
-
[[4nd6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Metja Metja]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ND6 OCA].
+
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:024611875</ref><references group="xtra"/><references/>
+
__TOC__
-
[[Category: Metja]]
+
</StructureSection>
-
[[Category: Tyrosine--tRNA ligase]]
+
[[Category: Large Structures]]
-
[[Category: Cooley, R B.]]
+
[[Category: Methanocaldococcus jannaschii DSM 2661]]
-
[[Category: Driggers, C M.]]
+
[[Category: Cooley RB]]
-
[[Category: Karplus, P A.]]
+
[[Category: Driggers CM]]
-
[[Category: Mehl, R A.]]
+
[[Category: Karplus PA]]
-
[[Category: 3-nitro-tyrosine amino-acyl trna synthetase]]
+
[[Category: Mehl RA]]
-
[[Category: Ligase]]
+
-
[[Category: Rossmann fold]]
+
-
[[Category: Trna]]
+

Current revision

Crystal structure of apo 3-nitro-tyrosine tRNA synthetase (5B) in the open form

PDB ID 4nd6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4nd6"
Personal tools