4ids
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| - | {{STRUCTURE_4ids|  PDB=4ids  |  SCENE=  }}  | ||
| - | ===Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis=== | ||
| - | {{ABSTRACT_PUBMED_24699642}} | ||
| - | == | + | ==Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis== | 
| - | [[4ids]] is a 1 chain structure with sequence from [ | + | <StructureSection load='4ids' size='340' side='right'caption='[[4ids]], [[Resolution|resolution]] 2.04Å' scene=''> | 
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4ids]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IDS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IDS FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ids FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ids OCA], [https://pdbe.org/4ids PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ids RCSB], [https://www.ebi.ac.uk/pdbsum/4ids PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ids ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O50443_MYCTU O50443_MYCTU]  | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The proline-utilization pathway in Mycobacterium tuberculosis (Mtb) has recently been identified as an important factor in Mtb persistence in vivo, suggesting that this pathway could be a valuable therapeutic target against tuberculosis (TB). In Mtb, two distinct enzymes perform the conversion of proline into glutamate: the first step is the oxidation of proline into Delta(1)-pyrroline-5-carboxylic acid (P5C) by the flavoenzyme proline dehydrogenase (PruB), and the second reaction involves converting the tautomeric form of P5C (glutamate-gamma-semialdehyde) into glutamate using the NAD(+)-dependent Delta(1)-pyrroline-5-carboxylic dehydrogenase (PruA). Here, the three-dimensional structures of Mtb-PruA, determined by X-ray crystallography, in the apo state and in complex with NAD(+) are described at 2.5 and 2.1 A resolution, respectively. The structure reveals a conserved NAD(+)-binding mode, common to other related enzymes. Species-specific conformational differences in the active site, however, linked to changes in the dimer interface, suggest possibilities for selective inhibition of Mtb-PruA despite its reasonably high sequence identity to other PruA enzymes. Using recombinant PruA and PruB, the proline-utilization pathway in Mtb has also been reconstituted in vitro. Functional validation using a novel NMR approach has demonstrated that the PruA and PruB enzymes are together sufficient to convert proline to glutamate, the first such demonstration for monofunctional proline-utilization enzymes. | ||
| - | + | Characterization of the proline-utilization pathway in Mycobacterium tuberculosis through structural and functional studies.,Lagautriere T, Bashiri G, Paterson NG, Berney M, Cook GM, Baker EN Acta Crystallogr D Biol Crystallogr. 2014 Apr 1;70(Pt 4):968-80. doi:, 10.1107/S1399004713034391. Epub 2014 Mar 19. PMID:24699642<ref>PMID:24699642</ref> | |
| - | <ref  | + | |
| - | [[ | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | 
| - | + | </div> | |
| - | + | <div class="pdbe-citations 4ids" style="background-color:#fffaf0;"></div> | |
| - | + | ||
| - | + | ==See Also== | |
| - | [[Category:  | + | *[[Pyrroline-5-carboxylate dehydrogenase|Pyrroline-5-carboxylate dehydrogenase]] | 
| - | [[Category:  | + | == References == | 
| - | [[Category:  | + | <references/> | 
| - | [[Category:  | + | __TOC__ | 
| - | [[Category:  | + | </StructureSection> | 
| - | + | [[Category: Large Structures]] | |
| - | + | [[Category: Mycobacterium tuberculosis H37Rv]] | |
| + | [[Category: Baker EN]] | ||
| + | [[Category: Bashiri G]] | ||
| + | [[Category: Lagautriere T]] | ||
Current revision
Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis
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