This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1plg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:56, 17 April 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_1plg| PDB=1plg | SCENE= }}
 
-
===EVIDENCE FOR THE EXTENDED HELICAL NATURE OF POLYSACCHARIDE EPITOPES. THE 2.8 ANGSTROMS RESOLUTION STRUCTURE AND THERMODYNAMICS OF LIGAND BINDING OF AN ANTIGEN BINDING FRAGMENT SPECIFIC FOR ALPHA-(2->8)-POLYSIALIC ACID===
 
-
{{ABSTRACT_PUBMED_7538787}}
 
-
==About this Structure==
+
==EVIDENCE FOR THE EXTENDED HELICAL NATURE OF POLYSACCHARIDE EPITOPES. THE 2.8 ANGSTROMS RESOLUTION STRUCTURE AND THERMODYNAMICS OF LIGAND BINDING OF AN ANTIGEN BINDING FRAGMENT SPECIFIC FOR ALPHA-(2->8)-POLYSIALIC ACID==
-
[[1plg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PLG OCA].
+
<StructureSection load='1plg' size='340' side='right'caption='[[1plg]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[1plg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PLG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PLG FirstGlance]. <br>
-
<ref group="xtra">PMID:007538787</ref><references group="xtra"/><references/>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1plg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1plg OCA], [https://pdbe.org/1plg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1plg RCSB], [https://www.ebi.ac.uk/pdbsum/1plg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1plg ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GCAM_MOUSE GCAM_MOUSE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pl/1plg_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1plg ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Altman, E.]]
+
[[Category: Altman E]]
-
[[Category: Bitter-Suermann, D.]]
+
[[Category: Bitter-Suermann D]]
-
[[Category: Brisson, J R.]]
+
[[Category: Brisson J-R]]
-
[[Category: Bundle, D R.]]
+
[[Category: Bundle DR]]
-
[[Category: Evans, S V.]]
+
[[Category: Evans SV]]
-
[[Category: Frosch, M.]]
+
[[Category: Frosch M]]
-
[[Category: Jennings, H J.]]
+
[[Category: Jennings HJ]]
-
[[Category: Klebert, S.]]
+
[[Category: Klebert S]]
-
[[Category: Kratzin, H.]]
+
[[Category: Kratzin H]]
-
[[Category: Rose, D R.]]
+
[[Category: Rose DR]]
-
[[Category: Sigurskjold, B W.]]
+
[[Category: Sigurskjold BW]]
-
[[Category: To, R.]]
+
[[Category: To R]]
-
[[Category: Tse, W C.]]
+
[[Category: Tse WC]]
-
[[Category: Vaesen, M.]]
+
[[Category: Vaesen M]]
-
[[Category: Weisgerber, C.]]
+
[[Category: Weisgerber C]]
-
[[Category: Young, N M.]]
+
[[Category: Young NM]]
-
[[Category: Immunoglobulin]]
+

Current revision

EVIDENCE FOR THE EXTENDED HELICAL NATURE OF POLYSACCHARIDE EPITOPES. THE 2.8 ANGSTROMS RESOLUTION STRUCTURE AND THERMODYNAMICS OF LIGAND BINDING OF AN ANTIGEN BINDING FRAGMENT SPECIFIC FOR ALPHA-(2->8)-POLYSIALIC ACID

PDB ID 1plg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools