2os3
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2os3" size="350" color="white" frame="true" align="right" spinBox="true" caption="2os3, resolution 2.26Å" /> '''Structures of actino...) |
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| - | [[Image:2os3.jpg|left|200px]]<br /><applet load="2os3" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2os3, resolution 2.26Å" /> | ||
| - | '''Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes'''<br /> | ||
| - | == | + | ==Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes== |
| - | + | <StructureSection load='2os3' size='340' side='right'caption='[[2os3]], [[Resolution|resolution]] 2.26Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[Category: | + | <table><tr><td colspan='2'>[[2os3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_M1_GAS Streptococcus pyogenes M1 GAS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OS3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OS3 FirstGlance]. <br> |
| - | [[Category: Streptococcus pyogenes]] | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.26Å</td></tr> |
| - | [[Category: Choi | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BB2:ACTINONIN'>BB2</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr> |
| - | [[Category: Kim | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2os3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2os3 OCA], [https://pdbe.org/2os3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2os3 RCSB], [https://www.ebi.ac.uk/pdbsum/2os3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2os3 ProSAT]</span></td></tr> |
| - | [[Category: Kim | + | </table> |
| - | [[Category: Lee | + | == Function == |
| - | [[Category: Moon | + | [https://www.uniprot.org/uniprot/DEF_STRP1 DEF_STRP1] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity). |
| - | [[Category: Parh | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/os/2os3_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | + | </jmolCheckbox> | |
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2os3 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Streptococcus pyogenes M1 GAS]] | ||
| + | [[Category: Choi K]] | ||
| + | [[Category: Kim EE]] | ||
| + | [[Category: Kim K-H]] | ||
| + | [[Category: Lee HK]] | ||
| + | [[Category: Moon JH]] | ||
| + | [[Category: Parh HS]] | ||
Current revision
Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes
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