1hyu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:43, 3 April 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_1hyu| PDB=1hyu | SCENE= }}
 
-
===CRYSTAL STRUCTURE OF INTACT AHPF===
 
-
{{ABSTRACT_PUBMED_11300769}}
 
-
==Function==
+
==CRYSTAL STRUCTURE OF INTACT AHPF==
-
[[http://www.uniprot.org/uniprot/AHPF_SALTY AHPF_SALTY]] Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein.
+
<StructureSection load='1hyu' size='340' side='right'caption='[[1hyu]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[1hyu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HYU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HYU FirstGlance]. <br>
-
[[1hyu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HYU OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==Reference==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hyu OCA], [https://pdbe.org/1hyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hyu RCSB], [https://www.ebi.ac.uk/pdbsum/1hyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hyu ProSAT]</span></td></tr>
-
<ref group="xtra">PMID:011300769</ref><references group="xtra"/><references/>
+
</table>
-
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
+
== Function ==
-
[[Category: Karplus, P A.]]
+
[https://www.uniprot.org/uniprot/AHPF_SALTY AHPF_SALTY] Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein.
-
[[Category: Poole, L B.]]
+
== Evolutionary Conservation ==
-
[[Category: Wood, Z A.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Nucleotide binding fold]]
+
Check<jmol>
-
[[Category: Oxidoreductase]]
+
<jmolCheckbox>
-
[[Category: Thiol-thiolate hydrogen bond]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hy/1hyu_consurf.spt"</scriptWhenChecked>
-
[[Category: Thioredoxin]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Thioredoxin reductase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hyu ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
 +
[[Category: Karplus PA]]
 +
[[Category: Poole LB]]
 +
[[Category: Wood ZA]]

Current revision

CRYSTAL STRUCTURE OF INTACT AHPF

PDB ID 1hyu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools