This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1n1t
From Proteopedia
(Difference between revisions)
| (7 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_1n1t| PDB=1n1t | SCENE= }} | ||
| - | ===Trypanosoma rangeli sialidase in complex with DANA at 1.6 A=== | ||
| - | {{ABSTRACT_PUBMED_12507479}} | ||
| - | == | + | ==Trypanosoma rangeli sialidase in complex with DANA at 1.6 A== |
| - | [[1n1t]] is a 1 chain structure with sequence from [ | + | <StructureSection load='1n1t' size='340' side='right'caption='[[1n1t]], [[Resolution|resolution]] 1.60Å' scene=''> |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[1n1t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_rangeli Trypanosoma rangeli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N1T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N1T FirstGlance]. <br> |
| - | < | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAN:2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n1t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n1t OCA], [https://pdbe.org/1n1t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n1t RCSB], [https://www.ebi.ac.uk/pdbsum/1n1t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n1t ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O44049_TRYRA O44049_TRYRA] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n1/1n1t_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n1t ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Trypanosoma rangeli]] | [[Category: Trypanosoma rangeli]] | ||
| - | [[Category: Alzari | + | [[Category: Alzari PM]] |
| - | [[Category: Amaya | + | [[Category: Amaya MF]] |
| - | [[Category: Buschiazzo | + | [[Category: Buschiazzo A]] |
| - | [[Category: Nguyen | + | [[Category: Nguyen T]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Trypanosoma rangeli sialidase in complex with DANA at 1.6 A
| |||||||||||

