1nf8
From Proteopedia
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- | {{STRUCTURE_1nf8| PDB=1nf8 | SCENE= }} | ||
- | ===Crystal structure of PhzD protein active site mutant with substrate=== | ||
- | {{ABSTRACT_PUBMED_12741825}} | ||
- | == | + | ==Crystal structure of PhzD protein active site mutant with substrate== |
- | [[1nf8]] is a 1 chain structure with sequence from [ | + | <StructureSection load='1nf8' size='340' side='right'caption='[[1nf8]], [[Resolution|resolution]] 1.60Å' scene=''> |
- | + | == Structural highlights == | |
- | == | + | <table><tr><td colspan='2'>[[1nf8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NF8 FirstGlance]. <br> |
- | < | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> |
- | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=ISC:(5S,6S)-5-[(1-CARBOXYETHENYL)OXY]-6-HYDROXYCYCLOHEXA-1,3-DIENE-1-CARBOXYLIC+ACID'>ISC</scene></td></tr> |
- | [[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nf8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nf8 OCA], [https://pdbe.org/1nf8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nf8 RCSB], [https://www.ebi.ac.uk/pdbsum/1nf8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nf8 ProSAT]</span></td></tr> |
- | [[ | + | </table> |
- | [[Category: | + | == Function == |
- | [[Category: | + | [https://www.uniprot.org/uniprot/PHZD1_PSEAE PHZD1_PSEAE] Involved in the biosynthesis of the antibiotic phenazine, a nitrogen-containing heterocyclic molecule. PhzD1 (operon phzA1B1C1E1F1G1) has a role in the biosynthesis of the phenazine during planktonic growth (PubMed:23129634). Catalyzes the hydrolysis of the vinyl ether functional group of 2-amino-2-deoxyisochorismate (ADIC), yielding pyruvate and trans-2,3-dihydro-3-hydroxyanthranilic acid (DHHA) (PubMed:12741825, PubMed:23129634). Also able to act on isochorismate, chorismate and 4-amino-4-deoxychorismate (ADC) as substrates (PubMed:12741825).<ref>PMID:12741825</ref> <ref>PMID:23129634</ref> <ref>PMID:11591691</ref> |
- | [[Category: | + | == Evolutionary Conservation == |
- | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
- | [[Category: | + | Check<jmol> |
- | [[Category: | + | <jmolCheckbox> |
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nf/1nf8_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nf8 ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Pseudomonas aeruginosa]] | ||
+ | [[Category: Calabrese K]] | ||
+ | [[Category: Eisenstein E]] | ||
+ | [[Category: Ladner JE]] | ||
+ | [[Category: Parsons F]] |
Current revision
Crystal structure of PhzD protein active site mutant with substrate
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