This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1r8i
From Proteopedia
(Difference between revisions)
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_1r8i| PDB=1r8i | SCENE= }} | ||
| - | ===Crystal structure of TraC=== | ||
| - | {{ABSTRACT_PUBMED_14673074}} | ||
| - | == | + | ==Crystal structure of TraC== |
| - | [[1r8i]] is a 1 chain structure with sequence from [ | + | <StructureSection load='1r8i' size='340' side='right'caption='[[1r8i]], [[Resolution|resolution]] 3.00Å' scene=''> |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[1r8i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R8I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1R8I FirstGlance]. <br> |
| - | < | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3Å</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1r8i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r8i OCA], [https://pdbe.org/1r8i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1r8i RCSB], [https://www.ebi.ac.uk/pdbsum/1r8i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r8i ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9L6G5_ECOLX Q9L6G5_ECOLX] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r8/1r8i_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r8i ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
| - | [[Category: Baron | + | [[Category: Large Structures]] |
| - | [[Category: Beck | + | [[Category: Baron C]] |
| - | [[Category: Waksman | + | [[Category: Beck MR]] |
| - | [[Category: Yeo | + | [[Category: Waksman G]] |
| - | [[Category: Yuan | + | [[Category: Yeo H-J]] |
| - | + | [[Category: Yuan Q]] | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of TraC
| |||||||||||
Categories: Escherichia coli | Large Structures | Baron C | Beck MR | Waksman G | Yeo H-J | Yuan Q

