3c0d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="3c0d" size="350" color="white" frame="true" align="right" spinBox="true" caption="3c0d, resolution 2.40&Aring;" /> '''Crystal structure of...)
Current revision (07:53, 9 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3c0d.jpg|left|200px]]<br /><applet load="3c0d" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="3c0d, resolution 2.40&Aring;" />
 
-
'''Crystal structure of the putative nitrite reductase NADPH (small subunit) oxidoreductase protein Q87HB1. Northeast Structural Genomics Consortium target VpR162'''<br />
 
-
==About this Structure==
+
==Crystal structure of the putative nitrite reductase NADPH (small subunit) oxidoreductase protein Q87HB1. Northeast Structural Genomics Consortium target VpR162==
-
3C0D is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C0D OCA].
+
<StructureSection load='3c0d' size='340' side='right'caption='[[3c0d]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
[[Category: Single protein]]
+
== Structural highlights ==
-
[[Category: Vibrio parahaemolyticus rimd 2210633]]
+
<table><tr><td colspan='2'>[[3c0d]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C0D FirstGlance]. <br>
-
[[Category: Abashidze, M.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
[[Category: Acton, T B.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Baran, M C.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c0d OCA], [https://pdbe.org/3c0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c0d RCSB], [https://www.ebi.ac.uk/pdbsum/3c0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c0d ProSAT], [https://www.topsan.org/Proteins/NESGC/3c0d TOPSAN]</span></td></tr>
-
[[Category: Fang, Y.]]
+
</table>
-
[[Category: Hunt, J F.]]
+
== Function ==
-
[[Category: Kuzin, A P.]]
+
[https://www.uniprot.org/uniprot/Q87HB1_VIBPA Q87HB1_VIBPA]
-
[[Category: Liu, J.]]
+
== Evolutionary Conservation ==
-
[[Category: Ma, L-C.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Montelione, G T.]]
+
Check<jmol>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
<jmolCheckbox>
-
[[Category: Owens, L.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c0/3c0d_consurf.spt"</scriptWhenChecked>
-
[[Category: Rost, B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Seetharaman, J.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Tong, L.]]
+
</jmolCheckbox>
-
[[Category: Vorobiev, S M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c0d ConSurf].
-
[[Category: Wang, D.]]
+
<div style="clear:both"></div>
-
[[Category: Xiao, R.]]
+
__TOC__
-
[[Category: nesg]]
+
</StructureSection>
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Large Structures]]
-
[[Category: oxidoreductase]]
+
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
-
[[Category: protein structure initiative]]
+
[[Category: Abashidze M]]
-
[[Category: psi-2]]
+
[[Category: Acton TB]]
-
[[Category: q87hb1]]
+
[[Category: Baran MC]]
-
[[Category: structural genomic]]
+
[[Category: Fang Y]]
-
[[Category: structure]]
+
[[Category: Hunt JF]]
-
[[Category: vpr162]]
+
[[Category: Kuzin AP]]
-
[[Category: xray]]
+
[[Category: Liu J]]
-
 
+
[[Category: Ma L-C]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 5 13:24:29 2008''
+
[[Category: Montelione GT]]
 +
[[Category: Owens L]]
 +
[[Category: Rost B]]
 +
[[Category: Seetharaman J]]
 +
[[Category: Tong L]]
 +
[[Category: Vorobiev SM]]
 +
[[Category: Wang D]]
 +
[[Category: Xiao R]]

Current revision

Crystal structure of the putative nitrite reductase NADPH (small subunit) oxidoreductase protein Q87HB1. Northeast Structural Genomics Consortium target VpR162

PDB ID 3c0d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3c0d"
Personal tools