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3c85
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="3c85" size="350" color="white" frame="true" align="right" spinBox="true" caption="3c85, resolution 1.90Å" /> '''Crystal structure of...) |
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| - | [[Image:3c85.jpg|left|200px]]<br /><applet load="3c85" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="3c85, resolution 1.90Å" /> | ||
| - | '''Crystal structure of TrkA domain of putative glutathione-regulated potassium-efflux KefB from Vibrio parahaemolyticus'''<br /> | ||
| - | == | + | ==Crystal structure of TrkA domain of putative glutathione-regulated potassium-efflux KefB from Vibrio parahaemolyticus== |
| - | + | <StructureSection load='3c85' size='340' side='right'caption='[[3c85]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [ | + | <table><tr><td colspan='2'>[[3c85]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibpa Vibpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C85 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C85 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | [ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP0827 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c85 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c85 OCA], [https://pdbe.org/3c85 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c85 RCSB], [https://www.ebi.ac.uk/pdbsum/3c85 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c85 ProSAT], [https://www.topsan.org/Proteins/MCSG/3c85 TOPSAN]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c8/3c85_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c85 ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | + | [[Category: Large Structures]] | |
| - | + | [[Category: Vibpa]] | |
| + | [[Category: Abdullah, J]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Wu, R]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Putative glutathione-regulated potassium-efflux kefb]] | ||
| + | [[Category: Transmembrane]] | ||
| + | [[Category: Transport]] | ||
| + | [[Category: Transport protein]] | ||
| + | [[Category: Trka domain]] | ||
| + | [[Category: Vibrio parahaemolyticus]] | ||
Current revision
Crystal structure of TrkA domain of putative glutathione-regulated potassium-efflux KefB from Vibrio parahaemolyticus
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