4q3m

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(New page: '''Unreleased structure''' The entry 4q3m is ON HOLD Authors: Stogios, P.J., Xu, X., Cui, H., Alcaide, M., Ferrer, M., Savchenko, A. Description:)
Current revision (17:27, 20 September 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 4q3m is ON HOLD
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==Crystal structure of MGS-M4, an aldo-keto reductase enzyme from a Medee basin deep-sea metagenome library==
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<StructureSection load='4q3m' size='340' side='right'caption='[[4q3m]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4q3m]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q3M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q3M FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.552&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q3m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q3m OCA], [https://pdbe.org/4q3m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q3m RCSB], [https://www.ebi.ac.uk/pdbsum/4q3m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q3m ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A0B5KNF6_9FIRM A0A0B5KNF6_9FIRM]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The present study provides a deeper view of protein functionality as a function of temperature, salt and pressure in deep-sea habitats. A set of eight different enzymes from five distinct deep-sea (3040-4908 m depth), moderately warm (14.0-16.5 degrees C) biotopes, characterized by a wide range of salinities (39-348 practical salinity units), were investigated for this purpose. An enzyme from a 'superficial' marine hydrothermal habitat (65 degrees C) was isolated and characterized for comparative purposes. We report here the first experimental evidence suggesting that in salt-saturated deep-sea habitats, the adaptation to high pressure is linked to high thermal resistance (P value = 0.0036). Salinity might therefore increase the temperature window for enzyme activity, and possibly microbial growth, in deep-sea habitats. As an example, Lake Medee, the largest hypersaline deep-sea anoxic lake of the Eastern Mediterranean Sea, where the water temperature is never higher than 16 degrees C, was shown to contain halopiezophilic-like enzymes that are most active at 70 degrees C and with denaturing temperatures of 71.4 degrees C. The determination of the crystal structures of five proteins revealed unknown molecular mechanisms involved in protein adaptation to poly-extremes as well as distinct active site architectures and substrate preferences relative to other structurally characterized enzymes.
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Authors: Stogios, P.J., Xu, X., Cui, H., Alcaide, M., Ferrer, M., Savchenko, A.
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Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats.,Alcaide M, Stogios PJ, Lafraya A, Tchigvintsev A, Flick R, Bargiela R, Chernikova TN, Reva ON, Hai T, Leggewie CC, Katzke N, La Cono V, Matesanz R, Jebbar M, Jaeger KE, Yakimov MM, Yakunin AF, Golyshin PN, Golyshina OV, Savchenko A, Ferrer M Environ Microbiol. 2014 Oct 20. doi: 10.1111/1462-2920.12660. PMID:25330254<ref>PMID:25330254</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4q3m" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Unidentified]]
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[[Category: Alcaide M]]
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[[Category: Cui H]]
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[[Category: Ferrer M]]
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[[Category: Savchenko A]]
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[[Category: Stogios PJ]]
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[[Category: Xu X]]

Current revision

Crystal structure of MGS-M4, an aldo-keto reductase enzyme from a Medee basin deep-sea metagenome library

PDB ID 4q3m

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