4kr7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:14, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4kr7| PDB=4kr7 | SCENE= }}
 
-
===Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP===
 
-
{{ABSTRACT_PUBMED_24705700}}
 
-
==Function==
+
==Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP==
-
[[http://www.uniprot.org/uniprot/THII_THEMA THII_THEMA]] Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS (By similarity).
+
<StructureSection load='4kr7' size='340' side='right'caption='[[4kr7]], [[Resolution|resolution]] 3.42&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[4kr7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KR7 FirstGlance]. <br>
-
[[4kr7]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KR7 OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.421&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==Reference==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kr7 OCA], [https://pdbe.org/4kr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kr7 RCSB], [https://www.ebi.ac.uk/pdbsum/4kr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kr7 ProSAT]</span></td></tr>
-
<ref group="xtra">PMID:024705700</ref><references group="xtra"/><references/>
+
</table>
-
[[Category: TRNA sulfurtransferase]]
+
== Function ==
-
[[Category: Ficner, R.]]
+
[https://www.uniprot.org/uniprot/THII_THEMA THII_THEMA] Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS (By similarity).
-
[[Category: Lakomek, K.]]
+
__TOC__
-
[[Category: Neumann, P.]]
+
</StructureSection>
-
[[Category: 4-thiouridine synthesis]]
+
[[Category: Large Structures]]
-
[[Category: Adenylation]]
+
[[Category: Thermotoga maritima MSB8]]
-
[[Category: Pp-loop motif]]
+
[[Category: Ficner R]]
-
[[Category: Sulfurtransferase]]
+
[[Category: Lakomek K]]
-
[[Category: Thiouridine]]
+
[[Category: Neumann P]]
-
[[Category: Thump domain]]
+
-
[[Category: Transferase-rna complex]]
+
-
[[Category: Trna modification]]
+

Current revision

Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP

PDB ID 4kr7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4kr7"
Personal tools