This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2e7p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:49, 13 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_2e7p| PDB=2e7p | SCENE= }}
 
-
===Crystal structure of the holo form of glutaredoxin C1 from populus tremula x tremuloides===
 
-
{{ABSTRACT_PUBMED_17460036}}
 
-
==About this Structure==
+
==Crystal structure of the holo form of glutaredoxin C1 from populus tremula x tremuloides==
-
[[2e7p]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Populus_tremula_x_populus_tremuloides Populus tremula x populus tremuloides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E7P OCA].
+
<StructureSection load='2e7p' size='340' side='right'caption='[[2e7p]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[2e7p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_tremula_x_Populus_tremuloides Populus tremula x Populus tremuloides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E7P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E7P FirstGlance]. <br>
-
<ref group="xtra">PMID:017460036</ref><references group="xtra"/><references/>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
[[Category: Populus tremula x populus tremuloides]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr>
-
[[Category: Aimoto, S.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e7p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e7p OCA], [https://pdbe.org/2e7p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e7p RCSB], [https://www.ebi.ac.uk/pdbsum/2e7p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e7p ProSAT]</span></td></tr>
-
[[Category: Hase, T.]]
+
</table>
-
[[Category: Jacquot, J P.]]
+
== Function ==
-
[[Category: Kawakami, T.]]
+
[https://www.uniprot.org/uniprot/Q5PSJ1_POPPZ Q5PSJ1_POPPZ]
-
[[Category: Kusunoki, M.]]
+
== Evolutionary Conservation ==
-
[[Category: Rouhier, N.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Takahashi, T.]]
+
Check<jmol>
-
[[Category: Unno, H.]]
+
<jmolCheckbox>
-
[[Category: Electron transport]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e7/2e7p_consurf.spt"</scriptWhenChecked>
-
[[Category: Glutaredoxin]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Poplar]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Thioredoxin fold]]
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e7p ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Populus tremula x Populus tremuloides]]
 +
[[Category: Aimoto S]]
 +
[[Category: Hase T]]
 +
[[Category: Jacquot JP]]
 +
[[Category: Kawakami T]]
 +
[[Category: Kusunoki M]]
 +
[[Category: Rouhier N]]
 +
[[Category: Takahashi T]]
 +
[[Category: Unno H]]

Current revision

Crystal structure of the holo form of glutaredoxin C1 from populus tremula x tremuloides

PDB ID 2e7p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools