1tr6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:15, 26 March 2025) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_1tr6| PDB=1tr6 | SCENE= }}
 
-
===NMR solution structure of omega-conotoxin [K10]GVIA, a cyclic cysteine knot peptide===
 
-
{{ABSTRACT_PUBMED_15166237}}
 
-
==Function==
+
==NMR solution structure of omega-conotoxin [K10]GVIA, a cyclic cysteine knot peptide==
-
[[http://www.uniprot.org/uniprot/CXO6_CONGE CXO6_CONGE]] Omega-conotoxins act at presynaptic membranes, they bind and block voltage-gated calcium channels (Cav).
+
<StructureSection load='1tr6' size='340' side='right'caption='[[1tr6]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1tr6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Conus_geographus Conus geographus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TR6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TR6 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tr6 OCA], [https://pdbe.org/1tr6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tr6 RCSB], [https://www.ebi.ac.uk/pdbsum/1tr6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tr6 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O16A_CONGE O16A_CONGE] Omega-conotoxins act at presynaptic membranes, they bind and block voltage-gated calcium channels (Cav). This toxin blocks N-type calcium channels (Cav2.2/CACNA1B) with a high potency (it displaces [125I]GVIA with an IC(50)=3.7-38 pM) (PubMed:10938268, PubMed:11724570).<ref>PMID:10938268</ref> <ref>PMID:11724570</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The omega-conotoxins from fish-hunting cone snails are potent inhibitors of voltage-gated calcium channels. The omega-conotoxins MVIIA and CVID are selective N-type calcium channel inhibitors with potential in the treatment of chronic pain. The beta and alpha(2)delta-1 auxiliary subunits influence the expression and characteristics of the alpha(1B) subunit of N-type channels and are differentially regulated in disease states, including pain. In this study, we examined the influence of these auxiliary subunits on the ability of the omega-conotoxins GVIA, MVIIA, CVID and analogues to inhibit peripheral and central forms of the rat N-type channels. Although the beta3 subunit had little influence on the on- and off-rates of omega-conotoxins, coexpression of alpha(2)delta with alpha(1B) significantly reduced on-rates and equilibrium inhibition at both the central and peripheral isoforms of the N-type channels. The alpha(2)delta also enhanced the selectivity of MVIIA, but not CVID, for the central isoform. Similar but less pronounced trends were also observed for N-type channels expressed in human embryonic kidney cells. The influence of alpha(2)delta was not affected by oocyte deglycosylation. The extent of recovery from the omega-conotoxin block was least for GVIA, intermediate for MVIIA, and almost complete for CVID. Application of a hyperpolarizing holding potential (-120 mV) did not significantly enhance the extent of CVID recovery. Interestingly, [R10K]MVIIA and [O10K]GVIA had greater recovery from the block, whereas [K10R]CVID had reduced recovery from the block, indicating that position 10 had an important influence on the extent of omega-conotoxin reversibility. Recovery from CVID block was reduced in the presence of alpha(2)delta in human embryonic kidney cells and in oocytes expressing alpha(1B-b). These results may have implications for the antinociceptive properties of omega-conotoxins, given that the alpha(2)delta subunit is up-regulated in certain pain states.
-
==About this Structure==
+
The alpha2delta auxiliary subunit reduces affinity of omega-conotoxins for recombinant N-type (Cav2.2) calcium channels.,Mould J, Yasuda T, Schroeder CI, Beedle AM, Doering CJ, Zamponi GW, Adams DJ, Lewis RJ J Biol Chem. 2004 Aug 13;279(33):34705-14. Epub 2004 May 27. PMID:15166237<ref>PMID:15166237</ref>
-
[[1tr6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Conus_geographus Conus geographus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TR6 OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<ref group="xtra">PMID:015166237</ref><references group="xtra"/><references/>
+
</div>
 +
<div class="pdbe-citations 1tr6" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Conus geographus]]
[[Category: Conus geographus]]
-
[[Category: Adams, D J.]]
+
[[Category: Large Structures]]
-
[[Category: Beedle, A M.]]
+
[[Category: Adams DJ]]
-
[[Category: Doering, C J.]]
+
[[Category: Beedle AM]]
-
[[Category: Lewis, R J.]]
+
[[Category: Doering CJ]]
-
[[Category: Mould, J.]]
+
[[Category: Lewis RJ]]
-
[[Category: Schroeder, C I.]]
+
[[Category: Mould J]]
-
[[Category: Yasuda, T.]]
+
[[Category: Schroeder CI]]
-
[[Category: Zamponi, G W.]]
+
[[Category: Yasuda T]]
-
[[Category: Cysteine knot]]
+
[[Category: Zamponi GW]]
-
[[Category: Four-loop frame work]]
+
-
[[Category: Toxin]]
+

Current revision

NMR solution structure of omega-conotoxin [K10]GVIA, a cyclic cysteine knot peptide

PDB ID 1tr6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools