2l71

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:39, 15 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
 +
==NMR solution structure of GIP in Bicellular media==
==NMR solution structure of GIP in Bicellular media==
-
<StructureSection load='2l71' size='340' side='right' caption='[[2l71]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''>
+
<StructureSection load='2l71' size='340' side='right'caption='[[2l71]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
[[2l71]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L71 OCA]. <br>
+
<table><tr><td colspan='2'>[[2l71]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L71 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L71 FirstGlance]. <br>
-
<b>[[Related_structure|Related:]]</b> [[1t5q|1t5q]], [[2b4n|2b4n]], [[2obu|2obu]], [[2l70|2l70]]<br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<b>Activity:</b> <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span><br>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l71 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l71 OCA], [https://pdbe.org/2l71 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l71 RCSB], [https://www.ebi.ac.uk/pdbsum/2l71 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l71 ProSAT]</span></td></tr>
-
<b>Resources:</b> <span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2l71 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l71 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2l71 RCSB], [http://www.ebi.ac.uk/pdbsum/2l71 PDBsum]</span><br>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GIP_HUMAN GIP_HUMAN] Potent stimulator of insulin secretion and relatively poor inhibitor of gastric acid secretion.
 +
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Glucose-dependent insulinotropic polypeptide (GIP) is an insulinotropic incretin hormone that stimulates insulin secretion during a meal. GIP has glucose lowering abilities and hence is considered as a potential target molecule for type 2 diabetes therapy. In this article, we present the solution structure of GIP in membrane-mimicking environments by proton NMR spectroscopy and molecular modelling. GIP adopts an alpha-helical conformation between residues Phe(6)-Gly(31) and Ala(13)-Gln(29) for micellar and bicellar media, respectively. Previously we examined the effect of N-terminal Ala substitution in GIP, but here eight GIP analogues were synthesised by replacing individual residues within the central 8-18 region with alanine. These studies showed relatively minor changes in biological activity as assessed by insulin releasing potency. However, at higher concentration, GIP(Ala(16)), and GIP(Ala(18)) showed insulin secreting activity higher than the native GIP (P&lt;0.01 to P&lt;0.001) in cultured pancreatic BRIN-BD11 cells. Receptor interaction studies of the native GIP with the extracellular domain of its receptor were performed by using two different docking algorithms. At the optimised docking conformation, the complex was stabilised by the presence of hydrophobic interactions and intermolecular hydrogen bonding. Further, we have identified some potentially important additional C-terminal interactions of GIP with its N-terminal extracellular receptor domain.
Glucose-dependent insulinotropic polypeptide (GIP) is an insulinotropic incretin hormone that stimulates insulin secretion during a meal. GIP has glucose lowering abilities and hence is considered as a potential target molecule for type 2 diabetes therapy. In this article, we present the solution structure of GIP in membrane-mimicking environments by proton NMR spectroscopy and molecular modelling. GIP adopts an alpha-helical conformation between residues Phe(6)-Gly(31) and Ala(13)-Gln(29) for micellar and bicellar media, respectively. Previously we examined the effect of N-terminal Ala substitution in GIP, but here eight GIP analogues were synthesised by replacing individual residues within the central 8-18 region with alanine. These studies showed relatively minor changes in biological activity as assessed by insulin releasing potency. However, at higher concentration, GIP(Ala(16)), and GIP(Ala(18)) showed insulin secreting activity higher than the native GIP (P&lt;0.01 to P&lt;0.001) in cultured pancreatic BRIN-BD11 cells. Receptor interaction studies of the native GIP with the extracellular domain of its receptor were performed by using two different docking algorithms. At the optimised docking conformation, the complex was stabilised by the presence of hydrophobic interactions and intermolecular hydrogen bonding. Further, we have identified some potentially important additional C-terminal interactions of GIP with its N-terminal extracellular receptor domain.
Line 11: Line 15:
Conformational, receptor interaction and alanine scan studies of glucose-dependent insulinotropic polypeptide.,Venneti KC, Malthouse JP, O'Harte FP, Hewage CM Biochim Biophys Acta. 2011 Jul;1814(7):882-8. Epub 2011 Apr 27. PMID:21539943<ref>PMID:21539943</ref>
Conformational, receptor interaction and alanine scan studies of glucose-dependent insulinotropic polypeptide.,Venneti KC, Malthouse JP, O'Harte FP, Hewage CM Biochim Biophys Acta. 2011 Jul;1814(7):882-8. Epub 2011 Apr 27. PMID:21539943<ref>PMID:21539943</ref>
-
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 2l71" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Alana, I.]]
+
[[Category: Homo sapiens]]
-
[[Category: Harte, F P.M O.]]
+
[[Category: Large Structures]]
-
[[Category: Hewage, C M.]]
+
[[Category: Alana I]]
-
[[Category: Malthouse, P J.G.]]
+
[[Category: Hewage CM]]
-
[[Category: Venneti, K C.]]
+
[[Category: Malthouse PJG]]
-
[[Category: Ala-scan]]
+
[[Category: O'Harte FPM]]
-
[[Category: Docking]]
+
[[Category: Venneti KC]]
-
[[Category: Gip]]
+
-
[[Category: Hormone]]
+
-
[[Category: Type 2 diabetes]]
+

Current revision

NMR solution structure of GIP in Bicellular media

PDB ID 2l71

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools