This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2la9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:40, 15 May 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
 +
==NMR structure of Pseudouridine_ASL_Tyr==
==NMR structure of Pseudouridine_ASL_Tyr==
-
<StructureSection load='2la9' size='340' side='right' caption='[[2la9]], [[NMR_Ensembles_of_Models | 8 NMR models]]' scene=''>
+
<StructureSection load='2la9' size='340' side='right'caption='[[2la9]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2la9]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LA9 OCA]. <br>
+
<table><tr><td colspan='2'>[[2la9]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LA9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LA9 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2lac|2lac]], [[2lbq|2lbq]], [[2lbr|2lbr]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2la9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2la9 OCA], [https://pdbe.org/2la9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2la9 RCSB], [https://www.ebi.ac.uk/pdbsum/2la9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2la9 ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2la9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2la9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2la9 RCSB], [http://www.ebi.ac.uk/pdbsum/2la9 PDBsum]</span></td></tr>
+
</table>
-
<table>
+
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 14: Line 14:
Conformation Effects of Base Modification on the Anticodon Stem-Loop of Bacillus subtilis tRNA(Tyr).,Denmon AP, Wang J, Nikonowicz EP J Mol Biol. 2011 Sep 16;412(2):285-303. Epub 2011 Jul 19. PMID:21782828<ref>PMID:21782828</ref>
Conformation Effects of Base Modification on the Anticodon Stem-Loop of Bacillus subtilis tRNA(Tyr).,Denmon AP, Wang J, Nikonowicz EP J Mol Biol. 2011 Sep 16;412(2):285-303. Epub 2011 Jul 19. PMID:21782828<ref>PMID:21782828</ref>
-
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2la9" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Denmon, A P.]]
+
[[Category: Large Structures]]
-
[[Category: Nikonowicz, E P.]]
+
[[Category: Denmon AP]]
-
[[Category: Wang, J.]]
+
[[Category: Nikonowicz EP]]
-
[[Category: Rna]]
+
[[Category: Wang J]]
-
[[Category: Tyrosyl-trna]]
+

Current revision

NMR structure of Pseudouridine_ASL_Tyr

PDB ID 2la9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools