4d0q

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(New page: '''Unreleased structure''' The entry 4d0q is ON HOLD Authors: Suits, M.D.L., Pluvinage, B., Law, A., Liu, Y., Palma, A.S., Chai, W., Feizi, T., Boraston, A.B. Description: Hyaluronan B...)
Current revision (11:16, 9 May 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 4d0q is ON HOLD
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==Hyaluronan Binding Module of the Streptococcal Pneumoniae Hyaluronate Lyase==
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<StructureSection load='4d0q' size='340' side='right'caption='[[4d0q]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4d0q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D0Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D0Q FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d0q OCA], [https://pdbe.org/4d0q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d0q RCSB], [https://www.ebi.ac.uk/pdbsum/4d0q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d0q ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/HYSA_STRPN HYSA_STRPN]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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For a subset of pathogenic microorganisms, including Streptococcus pneumoniae, the recognition and degradation of host hyaluronan contributes to bacterial spreading through the extracellular matrix and enhancing access to host-cell surfaces. The hyaluronate lyase, Hyl, presented on the surface of S. pneumoniae performs this role. Using glycan microarray screening, affinity electrophoresis, and isothermal titration calorimetry we show that the N-terminal module of Hyl is a hyaluronan-specific carbohydrate-binding module (CBM) and the founding member of CBM family 70. The 1.2 A resolution X-ray crystal structure of CBM70 revealed it to have a beta-sandwich fold similar to other CBMs. The electrostatic properties of the binding site, which was identified by site-directed mutagenesis, are distinct from other CBMs and complementary to its acidic ligand, hyaluronan. Dynamic light scattering and solution small-angle X-ray scattering (SAXS) revealed the full-length Hyl protein to exist as a monomer-dimer mixture in solution. Through a detailed analysis of the SAXS data we report the pseudo-atomic solution structures of the monomer and dimer forms of the full-length multimodular Hyl.
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Authors: Suits, M.D.L., Pluvinage, B., Law, A., Liu, Y., Palma, A.S., Chai, W., Feizi, T., Boraston, A.B.
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Conformational analysis of the Streptococcus pneumoniae hyaluronate lyase and characterization of its hyaluronan-specific carbohydrate-binding module.,Suits MD, Pluvinage B, Law A, Liu Y, Palma AS, Chai W, Feizi T, Boraston AB J Biol Chem. 2014 Aug 6. pii: jbc.M114.578435. PMID:25100731<ref>PMID:25100731</ref>
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Description: Hyaluronan Binding Module of the Streptococcal Pneumoniae Hyaluronate Lyase
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4d0q" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Hyaluronidase 3D structures|Hyaluronidase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Streptococcus pneumoniae TIGR4]]
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[[Category: Boraston AB]]
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[[Category: Chai W]]
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[[Category: Feizi T]]
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[[Category: Law A]]
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[[Category: Liu Y]]
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[[Category: Palma AS]]
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[[Category: Pluvinage B]]
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[[Category: Suits MDL]]

Current revision

Hyaluronan Binding Module of the Streptococcal Pneumoniae Hyaluronate Lyase

PDB ID 4d0q

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