2w9x
From Proteopedia
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- | == | + | |
- | <StructureSection load='2w9x' size='340' side='right' caption='[[2w9x]], [[Resolution|resolution]] 2.00Å' scene=''> | + | ==The active site of a carbohydrate esterase displays divergent catalytic and non-catalytic binding functions== |
+ | <StructureSection load='2w9x' size='340' side='right'caption='[[2w9x]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2w9x]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2w9x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cellvibrio_japonicus Cellvibrio japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W9X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W9X FirstGlance]. <br> |
- | </ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | |
- | <tr><td class="sblockLbl"><b> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w9x OCA], [https://pdbe.org/2w9x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w9x RCSB], [https://www.ebi.ac.uk/pdbsum/2w9x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w9x ProSAT]</span></td></tr> |
- | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </table> |
- | <table> | + | == Function == |
+ | [https://www.uniprot.org/uniprot/CE2B_CELJU CE2B_CELJU] Involved in the degradation of plant cell wall polysaccharides. Catalyzes the deacetylation of acetylated birchwood xylan and glucomannan, with a large preference for the latter, and of the synthetic substrate 4-nitrophenyl acetate (4-NPAc).<ref>PMID:19338387</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w9/2w9x_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w9/2w9x_consurf.spt"</scriptWhenChecked> |
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2w9x ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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The active site of a carbohydrate esterase displays divergent catalytic and noncatalytic binding functions.,Montanier C, Money VA, Pires VM, Flint JE, Pinheiro BA, Goyal A, Prates JA, Izumi A, Stalbrand H, Morland C, Cartmell A, Kolenova K, Topakas E, Dodson EJ, Bolam DN, Davies GJ, Fontes CM, Gilbert HJ PLoS Biol. 2009 Mar 31;7(3):e71. PMID:19338387<ref>PMID:19338387</ref> | The active site of a carbohydrate esterase displays divergent catalytic and noncatalytic binding functions.,Montanier C, Money VA, Pires VM, Flint JE, Pinheiro BA, Goyal A, Prates JA, Izumi A, Stalbrand H, Morland C, Cartmell A, Kolenova K, Topakas E, Dodson EJ, Bolam DN, Davies GJ, Fontes CM, Gilbert HJ PLoS Biol. 2009 Mar 31;7(3):e71. PMID:19338387<ref>PMID:19338387</ref> | ||
- | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
+ | <div class="pdbe-citations 2w9x" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Cellvibrio japonicus]] | [[Category: Cellvibrio japonicus]] | ||
- | [[Category: Benedita | + | [[Category: Large Structures]] |
- | [[Category: Bolam | + | [[Category: Benedita PA]] |
- | [[Category: Cartmell | + | [[Category: Bolam DN]] |
- | [[Category: Davies | + | [[Category: Cartmell A]] |
- | [[Category: Dobson | + | [[Category: Davies GJ]] |
- | [[Category: Flint | + | [[Category: Dobson E]] |
- | [[Category: Fontes | + | [[Category: Flint JE]] |
- | [[Category: Gilbert | + | [[Category: Fontes CM]] |
- | [[Category: Goyal | + | [[Category: Gilbert HJ]] |
- | [[Category: Izumi | + | [[Category: Goyal A]] |
- | [[Category: Kolenova | + | [[Category: Izumi A]] |
- | [[Category: Money | + | [[Category: Kolenova K]] |
- | [[Category: Montanier | + | [[Category: Money VA]] |
- | [[Category: Morland | + | [[Category: Montanier C]] |
- | [[Category: Pires | + | [[Category: Morland C]] |
- | [[Category: Prates | + | [[Category: Pires V]] |
- | [[Category: Stalbrand | + | [[Category: Prates JA]] |
- | [[Category: Topakas | + | [[Category: Stalbrand H]] |
- | + | [[Category: Topakas E]] | |
- | + | ||
- | + |
Current revision
The active site of a carbohydrate esterase displays divergent catalytic and non-catalytic binding functions
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Categories: Cellvibrio japonicus | Large Structures | Benedita PA | Bolam DN | Cartmell A | Davies GJ | Dobson E | Flint JE | Fontes CM | Gilbert HJ | Goyal A | Izumi A | Kolenova K | Money VA | Montanier C | Morland C | Pires V | Prates JA | Stalbrand H | Topakas E