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2wbn
From Proteopedia
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| - | == | + | |
| - | <StructureSection load='2wbn' size='340' side='right' caption='[[2wbn]], [[Resolution|resolution]] 1.90Å' scene=''> | + | ==Crystal structure of the g2p (large terminase) nuclease domain from the bacteriophage SPP1== |
| + | <StructureSection load='2wbn' size='340' side='right'caption='[[2wbn]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2wbn]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2wbn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpspp Bpspp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WBN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WBN FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2wc9|2wc9]]</div></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wbn OCA], [https://pdbe.org/2wbn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wbn RCSB], [https://www.ebi.ac.uk/pdbsum/2wbn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wbn ProSAT]</span></td></tr> | |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </table> |
| - | <table> | + | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wb/2wbn_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wb/2wbn_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wbn ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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Structural basis for the nuclease activity of a bacteriophage large terminase.,Smits C, Chechik M, Kovalevskiy OV, Shevtsov MB, Foster AW, Alonso JC, Antson AA EMBO Rep. 2009 Jun;10(6):592-8. Epub 2009 May 15. PMID:19444313<ref>PMID:19444313</ref> | Structural basis for the nuclease activity of a bacteriophage large terminase.,Smits C, Chechik M, Kovalevskiy OV, Shevtsov MB, Foster AW, Alonso JC, Antson AA EMBO Rep. 2009 Jun;10(6):592-8. Epub 2009 May 15. PMID:19444313<ref>PMID:19444313</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
| + | <div class="pdbe-citations 2wbn" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Terminase|Terminase]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Bpspp]] |
| - | [[Category: Alonso, J C | + | [[Category: Large Structures]] |
| - | [[Category: Antson, A A | + | [[Category: Alonso, J C]] |
| - | [[Category: Chechik, M | + | [[Category: Antson, A A]] |
| - | [[Category: Foster, A W | + | [[Category: Chechik, M]] |
| - | [[Category: Kovalevskiy, O V | + | [[Category: Foster, A W]] |
| - | [[Category: Shevtsov, M B | + | [[Category: Kovalevskiy, O V]] |
| - | [[Category: Smits, C | + | [[Category: Shevtsov, M B]] |
| + | [[Category: Smits, C]] | ||
[[Category: Dna packaging]] | [[Category: Dna packaging]] | ||
[[Category: Large terminase]] | [[Category: Large terminase]] | ||
[[Category: Nuclease]] | [[Category: Nuclease]] | ||
[[Category: Viral protein]] | [[Category: Viral protein]] | ||
Current revision
Crystal structure of the g2p (large terminase) nuclease domain from the bacteriophage SPP1
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