2y7k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:02, 1 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
==DNTR INDUCER BINDING DOMAIN IN COMPLEX WITH SALICYLATE. MONOCLINIC CRYSTAL FORM==
+
 
-
<StructureSection load='2y7k' size='340' side='right' caption='[[2y7k]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
+
==DntR Inducer Binding Domain in Complex with Salicylate. Monoclinic crystal form==
 +
<StructureSection load='2y7k' size='340' side='right'caption='[[2y7k]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2y7k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_sp._dnt Burkholderia sp. dnt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y7K OCA]. <br>
+
<table><tr><td colspan='2'>[[2y7k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_sp._DNT Burkholderia sp. DNT]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y7K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Y7K FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAL:2-HYDROXYBENZOIC+ACID'>SAL</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1uth|1uth]], [[2y7r|2y7r]], [[2y84|2y84]], [[2y7w|2y7w]], [[1utb|1utb]], [[2y7p|2y7p]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAL:2-HYDROXYBENZOIC+ACID'>SAL</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2y7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y7k OCA], [https://pdbe.org/2y7k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2y7k RCSB], [https://www.ebi.ac.uk/pdbsum/2y7k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2y7k ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2y7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y7k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2y7k RCSB], [http://www.ebi.ac.uk/pdbsum/2y7k PDBsum]</span></td></tr>
+
</table>
-
<table>
+
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7WT50_9BURK Q7WT50_9BURK]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 14: Line 16:
Crystal structures of DntR inducer binding domains in complex with salicylate offer insights into the activation of LysR-type transcriptional regulators.,Devesse L, Smirnova I, Lonneborg R, Kapp U, Brzezinski P, Leonard GA, Dian C Mol Microbiol. 2011 Jul;81(2):354-367. doi:, 10.1111/j.1365-2958.2011.07673.x. Epub 2011 Jun 22. PMID:21692874<ref>PMID:21692874</ref>
Crystal structures of DntR inducer binding domains in complex with salicylate offer insights into the activation of LysR-type transcriptional regulators.,Devesse L, Smirnova I, Lonneborg R, Kapp U, Brzezinski P, Leonard GA, Dian C Mol Microbiol. 2011 Jul;81(2):354-367. doi:, 10.1111/j.1365-2958.2011.07673.x. Epub 2011 Jun 22. PMID:21692874<ref>PMID:21692874</ref>
-
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2y7k" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Burkholderia sp. dnt]]
+
[[Category: Burkholderia sp. DNT]]
-
[[Category: Brzezinski, P.]]
+
[[Category: Large Structures]]
-
[[Category: Devesse, L.]]
+
[[Category: Brzezinski P]]
-
[[Category: Dian, C.]]
+
[[Category: Devesse L]]
-
[[Category: Kapp, U.]]
+
[[Category: Dian C]]
-
[[Category: Leonard, G A.]]
+
[[Category: Kapp U]]
-
[[Category: Lonneborg, R.]]
+
[[Category: Leonard GA]]
-
[[Category: Smirnova, I.]]
+
[[Category: Lonneborg R]]
-
[[Category: Lysr type]]
+
[[Category: Smirnova I]]
-
[[Category: Transcription]]
+
-
[[Category: Transcription factor]]
+
-
[[Category: Transcription regulator]]
+

Current revision

DntR Inducer Binding Domain in Complex with Salicylate. Monoclinic crystal form

PDB ID 2y7k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools