3b18

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==Rv0098 of Mycobacterium tuberculosis with ordered loop between beta-4 and beta-5==
==Rv0098 of Mycobacterium tuberculosis with ordered loop between beta-4 and beta-5==
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<StructureSection load='3b18' size='340' side='right' caption='[[3b18]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
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<StructureSection load='3b18' size='340' side='right'caption='[[3b18]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3b18]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B18 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3B18 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3b18]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B18 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B18 FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DAO:LAURIC+ACID'>DAO</scene><br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2pfc|2pfc]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAO:LAURIC+ACID'>DAO</scene></td></tr>
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<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rv0098 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 Mycobacterium tuberculosis])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b18 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b18 OCA], [https://pdbe.org/3b18 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b18 RCSB], [https://www.ebi.ac.uk/pdbsum/3b18 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b18 ProSAT]</span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3b18 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b18 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3b18 RCSB], [http://www.ebi.ac.uk/pdbsum/3b18 PDBsum]</span></td></tr>
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</table>
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<table>
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== Function ==
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[https://www.uniprot.org/uniprot/INLPD_MYCTU INLPD_MYCTU] Involved in the biosynthesis of a unique class of isonitrile lipopeptides (INLPs) that seem to function as virulence factors in M.tuberculosis and to play a role in metal acquisition (PubMed:28634299). Catalyzes a Michael addition of glycine to the beta-position of an alpha,beta-unsaturated fatty acyl-[ACP], producing a (3R)-3-[(carboxymethyl)amino]fatty acid. Acts on the (2E)-decenoyl moiety loaded on the acyl-carrier protein (ACP) Rv0100, forming the product (3R)-3-[(carboxymethyl)amino]decanoate released from the ACP (By similarity). Displays thioesterase activity with a preference for long chain fatty acyl groups; in vitro, cleaves the thioester linkage of palmitoyl-CoA, stearoyl-CoA, lauroyl-CoA and hexanoyl-CoA (PubMed:17524985). Contains low levels of trans-enoyl hydratase activity (PubMed:19136596).[UniProtKB:B2HKM2]<ref>PMID:17524985</ref> <ref>PMID:19136596</ref> <ref>PMID:28634299</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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Insights into the Substrate Specificity of a Thioesterase Rv0098 of Mycobacterium Tuberculosis through X-ray Crystallographic and Molecular Dynamics Studies.,Maity K, Bajaj P, Surolia N, Surolia A, Suguna K J Biomol Struct Dyn. 2012 Apr;29(5):973-83. PMID:22292955<ref>PMID:22292955</ref>
Insights into the Substrate Specificity of a Thioesterase Rv0098 of Mycobacterium Tuberculosis through X-ray Crystallographic and Molecular Dynamics Studies.,Maity K, Bajaj P, Surolia N, Surolia A, Suguna K J Biomol Struct Dyn. 2012 Apr;29(5):973-83. PMID:22292955<ref>PMID:22292955</ref>
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 3b18" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Large Structures]]
[[Category: Mycobacterium tuberculosis]]
[[Category: Mycobacterium tuberculosis]]
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[[Category: Maity, K.]]
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[[Category: Maity K]]
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[[Category: Suguna, K.]]
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[[Category: Suguna K]]
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[[Category: Acyl carrier protein]]
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[[Category: Hot dog fold]]
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[[Category: Hydrolase]]
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[[Category: Long-chain fatty acyl-coa thioesterase]]
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[[Category: Mycobacterium tuberculosis]]
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Current revision

Rv0098 of Mycobacterium tuberculosis with ordered loop between beta-4 and beta-5

PDB ID 3b18

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