3avp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:57, 4 October 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with Pantothenol==
==Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with Pantothenol==
-
<StructureSection load='3avp' size='340' side='right' caption='[[3avp]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='3avp' size='340' side='right'caption='[[3avp]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3avp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AVP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AVP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3avp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AVP FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MV2:(2S)-2,4-DIHYDROXY-N-(3-HYDROXYPROPYL)-3,3-DIMETHYLBUTANAMIDE'>MV2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3aez|3aez]], [[3af0|3af0]], [[3af1|3af1]], [[3af2|3af2]], [[3af3|3af3]], [[3af4|3af4]], [[3avo|3avo]], [[3avq|3avq]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MV2:(2S)-2,4-DIHYDROXY-N-(3-HYDROXYPROPYL)-3,3-DIMETHYLBUTANAMIDE'>MV2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">coaA, Rv1092c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 Mycobacterium tuberculosis])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3avp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3avp OCA], [https://pdbe.org/3avp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3avp RCSB], [https://www.ebi.ac.uk/pdbsum/3avp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3avp ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantothenate_kinase Pantothenate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.33 2.7.1.33] </span></td></tr>
+
</table>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3avp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3avp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3avp RCSB], [http://www.ebi.ac.uk/pdbsum/3avp PDBsum]</span></td></tr>
+
== Function ==
-
<table>
+
[https://www.uniprot.org/uniprot/COAA_MYCTU COAA_MYCTU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 16:
Location and conformation of pantothenate and its derivatives in Mycobacterium tuberculosis pantothenate kinase: insights into enzyme action.,Chetnani B, Kumar P, Abhinav KV, Chhibber M, Surolia A, Vijayan M Acta Crystallogr D Biol Crystallogr. 2011 Sep;67(Pt 9):774-83. doi:, 10.1107/S0907444911024462. Epub 2011 Aug 9. PMID:21904030<ref>PMID:21904030</ref>
Location and conformation of pantothenate and its derivatives in Mycobacterium tuberculosis pantothenate kinase: insights into enzyme action.,Chetnani B, Kumar P, Abhinav KV, Chhibber M, Surolia A, Vijayan M Acta Crystallogr D Biol Crystallogr. 2011 Sep;67(Pt 9):774-83. doi:, 10.1107/S0907444911024462. Epub 2011 Aug 9. PMID:21904030<ref>PMID:21904030</ref>
-
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3avp" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Pantothenate kinase 3D structures|Pantothenate kinase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mycobacterium tuberculosis]]
[[Category: Mycobacterium tuberculosis]]
-
[[Category: Pantothenate kinase]]
+
[[Category: Abhinav KV]]
-
[[Category: Abhinav, K V.]]
+
[[Category: Chetnani B]]
-
[[Category: Chetnani, B.]]
+
[[Category: Chhibber M]]
-
[[Category: Chhibber, M.]]
+
[[Category: Kumar P]]
-
[[Category: Kumar, P.]]
+
[[Category: Surolia A]]
-
[[Category: Surolia, A.]]
+
[[Category: Vijayan M]]
-
[[Category: Vijayan, M.]]
+
-
[[Category: Coa biosynthesis]]
+
-
[[Category: Homodimer]]
+
-
[[Category: Nucleotide binding]]
+
-
[[Category: Transferase-transferase inhibitor complex]]
+

Current revision

Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with Pantothenol

PDB ID 3avp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools