4n4p

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==Crystal Structure of N-acetylneuraminate lyase from Mycoplasma synoviae, crystal form I==
==Crystal Structure of N-acetylneuraminate lyase from Mycoplasma synoviae, crystal form I==
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<StructureSection load='4n4p' size='340' side='right' caption='[[4n4p]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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<StructureSection load='4n4p' size='340' side='right'caption='[[4n4p]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4n4p]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N4P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4N4P FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4n4p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycoplasmopsis_synoviae_53 Mycoplasmopsis synoviae 53]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N4P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4N4P FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene><br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4n4q|4n4q]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/N-acetylneuraminate_lyase N-acetylneuraminate lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.3.3 4.1.3.3] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4n4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4n4p OCA], [https://pdbe.org/4n4p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4n4p RCSB], [https://www.ebi.ac.uk/pdbsum/4n4p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4n4p ProSAT]</span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4n4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4n4p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4n4p RCSB], [http://www.ebi.ac.uk/pdbsum/4n4p PDBsum]</span></td></tr>
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</table>
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<table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q4A6K4_MYCS5 Q4A6K4_MYCS5]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The GroEL/ES chaperonin system functions as a protein folding cage. Many obligate substrates of GroEL share the (betaalpha)8 TIM-barrel fold, but how the chaperonin promotes folding of these proteins is not known. Here, we analyzed the folding of DapA at peptide resolution using hydrogen/deuterium exchange and mass spectrometry. During spontaneous folding, all elements of the DapA TIM barrel acquire structure simultaneously in a process associated with a long search time. In contrast, GroEL/ES accelerates folding more than 30-fold by catalyzing segmental structure formation in the TIM barrel. Segmental structure formation is also observed during the fast spontaneous folding of a structural homolog of DapA from a bacterium that lacks GroEL/ES. Thus, chaperonin independence correlates with folding properties otherwise enforced by protein confinement in the GroEL/ES cage. We suggest that folding catalysis by GroEL/ES is required by a set of proteins to reach native state at a biologically relevant timescale, avoiding aggregation or degradation.
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GroEL/ES Chaperonin Modulates the Mechanism and Accelerates the Rate of TIM-Barrel Domain Folding.,Georgescauld F, Popova K, Gupta AJ, Bracher A, Engen JR, Hayer-Hartl M, Hartl FU Cell. 2014 May 8;157(4):922-34. doi: 10.1016/j.cell.2014.03.038. PMID:24813614<ref>PMID:24813614</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4n4p" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[N-acetylneuraminate lyase 3D structures|N-acetylneuraminate lyase 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: N-acetylneuraminate lyase]]
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[[Category: Large Structures]]
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[[Category: Bracher, A.]]
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[[Category: Mycoplasmopsis synoviae 53]]
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[[Category: Engen, J R.]]
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[[Category: Bracher A]]
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[[Category: Georgescauld, F.]]
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[[Category: Engen JR]]
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[[Category: Gupta, A J.]]
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[[Category: Georgescauld F]]
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[[Category: Hartl, F U.]]
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[[Category: Gupta AJ]]
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[[Category: Hayer-Hartl, M.]]
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[[Category: Hartl FU]]
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[[Category: Popova, K.]]
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[[Category: Hayer-Hartl M]]
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[[Category: Lyase]]
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[[Category: Popova K]]
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[[Category: Tim barrel]]
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Current revision

Crystal Structure of N-acetylneuraminate lyase from Mycoplasma synoviae, crystal form I

PDB ID 4n4p

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