3ghd
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domain== | ==Crystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domain== | ||
| - | <StructureSection load='3ghd' size='340' side='right' caption='[[3ghd]], [[Resolution|resolution]] 1.81Å' scene=''> | + | <StructureSection load='3ghd' size='340' side='right'caption='[[3ghd]], [[Resolution|resolution]] 1.81Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ghd]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3ghd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3fio 3fio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GHD FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ghd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ghd OCA], [https://pdbe.org/3ghd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ghd RCSB], [https://www.ebi.ac.uk/pdbsum/3ghd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ghd ProSAT], [https://www.topsan.org/Proteins/MCSG/3ghd TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gh/3ghd_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gh/3ghd_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ghd ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Atcc 43587]] |
| - | [[Category: Brown, G | + | [[Category: Large Structures]] |
| - | [[Category: Chruszcz, M | + | [[Category: Brown, G]] |
| - | [[Category: Dong, A | + | [[Category: Chruszcz, M]] |
| - | [[Category: Edwards, A M | + | [[Category: Dong, A]] |
| - | [[Category: Joachimiak, A | + | [[Category: Edwards, A M]] |
| - | [[Category: | + | [[Category: Joachimiak, A]] |
| - | [[Category: Minor, W | + | [[Category: Structural genomic]] |
| - | [[Category: Proudfoot, M | + | [[Category: Minor, W]] |
| - | [[Category: Savchenko, A | + | [[Category: Proudfoot, M]] |
| - | [[Category: Xu, X | + | [[Category: Savchenko, A]] |
| - | [[Category: Yaleunin, A | + | [[Category: Xu, X]] |
| + | [[Category: Yaleunin, A]] | ||
[[Category: Apc40009]] | [[Category: Apc40009]] | ||
[[Category: Cystathionine beta-synthase domain protein]] | [[Category: Cystathionine beta-synthase domain protein]] | ||
| Line 35: | Line 40: | ||
[[Category: Metal bindin]] | [[Category: Metal bindin]] | ||
[[Category: Metal binding protein]] | [[Category: Metal binding protein]] | ||
| - | [[Category: Midwest center for structural genomic]] | ||
[[Category: Nucleotide binding protein]] | [[Category: Nucleotide binding protein]] | ||
[[Category: Pf1953]] | [[Category: Pf1953]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
Current revision
Crystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domain
| |||||||||||
Categories: Atcc 43587 | Large Structures | Brown, G | Chruszcz, M | Dong, A | Edwards, A M | Joachimiak, A | Structural genomic | Minor, W | Proudfoot, M | Savchenko, A | Xu, X | Yaleunin, A | Apc40009 | Cystathionine beta-synthase domain protein | Mcsg | Metal bindin | Metal binding protein | Nucleotide binding protein | Pf1953 | PSI, Protein structure initiative
